Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02954

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
3,283,454	+				-0.3
3,283,455	-				-0.5
3,283,462	-				-0.4
3,283,462	-				+1.5
3,283,462	-				-0.9
3,283,540	+				+1.3
3,283,566	+				-0.8
3,283,566	+				-0.2
3,283,566	+				-1.5
3,283,574	-				-0.6
3,283,601	+				+0.5
3,283,648	-				-1.5
3,283,755	-				-0.2
3,283,805	-				-1.6
3,283,853	+		MIT1002_02953	0.19	+0.2
3,283,854	+		MIT1002_02953	0.20	-0.5
3,283,854	+		MIT1002_02953	0.20	+1.6
3,283,861	-		MIT1002_02953	0.21	+0.4
3,283,861	-		MIT1002_02953	0.21	-0.1
3,283,932	+		MIT1002_02953	0.41	+1.2
3,283,932	+		MIT1002_02953	0.41	+0.6
3,283,940	-		MIT1002_02953	0.43	+0.5
3,283,940	-		MIT1002_02953	0.43	+0.4
3,283,940	-		MIT1002_02953	0.43	+1.2
3,284,019	-		MIT1002_02953	0.64	+0.0
3,284,039	-		MIT1002_02953	0.70	+0.2
3,284,046	+		MIT1002_02953	0.72	+1.1
3,284,064	+		MIT1002_02953	0.76	-0.8
3,284,064	+		MIT1002_02953	0.76	+0.4
3,284,072	-		MIT1002_02953	0.79	+0.4
3,284,317	-				+0.6
3,284,358	+				+0.8
3,284,388	+				-1.5
3,284,390	+				-0.3
3,284,406	-				+0.5
3,284,532	-		MIT1002_02954	0.27	-0.1
3,284,644	+		MIT1002_02954	0.44	+1.6
3,284,644	+		MIT1002_02954	0.44	+0.3
3,284,644	+		MIT1002_02954	0.44	-1.3
3,284,652	-		MIT1002_02954	0.45	-1.2
3,284,663	+		MIT1002_02954	0.47	-0.9
3,284,725	+		MIT1002_02954	0.56	+0.3
3,284,759	-		MIT1002_02954	0.61	+0.2
3,284,809	-		MIT1002_02954	0.68	+0.4
3,284,811	+		MIT1002_02954	0.69	+0.4
3,284,835	-		MIT1002_02954	0.72	-0.2
3,284,850	-		MIT1002_02954	0.75	-1.0
3,284,851	+		MIT1002_02954	0.75	-1.5
3,284,908	+		MIT1002_02954	0.83	-0.6
3,285,046	-				+0.5
3,285,066	+				+0.6
3,285,112	+				+1.0
3,285,128	-				-1.4
3,285,139	+				-0.0
3,285,146	+				+0.5
3,285,190	+				-1.3
3,285,193	+				+0.5
3,285,198	+				-0.4
3,285,261	+				-1.0
3,285,325	+				-0.4
3,285,325	+				+1.4
3,285,325	+				-0.5
3,285,455	-		MIT1002_02955	0.21	-0.2
3,285,560	+		MIT1002_02955	0.30	-0.3
3,285,561	+		MIT1002_02955	0.30	+1.6
3,285,819	-		MIT1002_02955	0.52	-0.2
3,285,848	+		MIT1002_02955	0.54	-0.7
3,285,848	-		MIT1002_02955	0.54	-1.2
3,285,961	+		MIT1002_02955	0.64	+0.7