Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02952

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
3,281,997	+		MIT1002_02950	0.28	+0.1
3,282,005	-		MIT1002_02950	0.30	+1.1
3,282,005	-		MIT1002_02950	0.30	-0.2
3,282,058	-		MIT1002_02950	0.48	-3.5
3,282,173	-		MIT1002_02950	0.85	-0.0
3,282,184	+		MIT1002_02950	0.88	+1.0
3,282,206	+				-0.9
3,282,214	+				-1.1
3,282,214	-				+1.2
3,282,222	-				-0.5
3,282,342	+				+1.7
3,282,347	+				-2.4
3,282,347	+				-0.1
3,282,454	-				-0.9
3,282,454	-				-0.7
3,282,514	+				-0.3
3,282,524	+				+0.1
3,282,533	+		MIT1002_02951	0.11	-0.9
3,282,536	+		MIT1002_02951	0.12	+0.1
3,282,536	+		MIT1002_02951	0.12	-0.6
3,282,536	+		MIT1002_02951	0.12	+1.0
3,282,536	+		MIT1002_02951	0.12	+0.5
3,282,536	+		MIT1002_02951	0.12	-0.9
3,282,536	+		MIT1002_02951	0.12	-2.4
3,282,539	-		MIT1002_02951	0.13	+0.4
3,282,541	-		MIT1002_02951	0.13	-0.7
3,282,544	-		MIT1002_02951	0.14	-0.4
3,282,544	-		MIT1002_02951	0.14	+0.8
3,282,544	-		MIT1002_02951	0.14	-0.9
3,282,544	-		MIT1002_02951	0.14	-0.4
3,282,544	-		MIT1002_02951	0.14	+0.4
3,282,668	+		MIT1002_02951	0.44	+0.7
3,282,775	-		MIT1002_02951	0.70	+1.0
3,282,867	-				+0.2
3,282,993	+				-2.5
3,282,993	+				+0.4
3,282,993	+				-0.4
3,282,993	+				-0.2
3,283,001	-				-0.3
3,283,001	-				-2.5
3,283,001	-				-0.6
3,283,001	-				-1.1
3,283,001	-				+1.0
3,283,001	-				-0.9
3,283,001	-				-1.2
3,283,001	-				+0.8
3,283,030	+				-0.1
3,283,043	+		MIT1002_02952	0.11	+0.8
3,283,043	+		MIT1002_02952	0.11	+1.0
3,283,051	-		MIT1002_02952	0.13	+1.4
3,283,051	-		MIT1002_02952	0.13	+0.8
3,283,257	+		MIT1002_02952	0.58	+0.6
3,283,297	-		MIT1002_02952	0.67	+0.3
3,283,332	-		MIT1002_02952	0.74	-1.8
3,283,335	-		MIT1002_02952	0.75	-0.1
3,283,337	-		MIT1002_02952	0.75	-0.7
3,283,340	+		MIT1002_02952	0.76	+1.7
3,283,340	-		MIT1002_02952	0.76	+1.7
3,283,454	+				-0.3
3,283,455	-				-0.5
3,283,462	-				-0.4
3,283,462	-				+1.5
3,283,462	-				-0.9
3,283,540	+				+1.3
3,283,566	+				-0.8
3,283,566	+				-0.2
3,283,566	+				-1.5
3,283,574	-				-0.6
3,283,601	+				+0.5
3,283,648	-				-1.5
3,283,755	-				-0.2
3,283,805	-				-1.6
3,283,853	+		MIT1002_02953	0.19	+0.2
3,283,854	+		MIT1002_02953	0.20	-0.5
3,283,854	+		MIT1002_02953	0.20	+1.6
3,283,861	-		MIT1002_02953	0.21	+0.4
3,283,861	-		MIT1002_02953	0.21	-0.1
3,283,932	+		MIT1002_02953	0.41	+1.2
3,283,932	+		MIT1002_02953	0.41	+0.6
3,283,940	-		MIT1002_02953	0.43	+0.5
3,283,940	-		MIT1002_02953	0.43	+0.4
3,283,940	-		MIT1002_02953	0.43	+1.2
3,284,019	-		MIT1002_02953	0.64	+0.0
3,284,039	-		MIT1002_02953	0.70	+0.2
3,284,046	+		MIT1002_02953	0.72	+1.1
3,284,064	+		MIT1002_02953	0.76	-0.8
3,284,064	+		MIT1002_02953	0.76	+0.4
3,284,072	-		MIT1002_02953	0.79	+0.4
3,284,317	-				+0.6
3,284,358	+				+0.8
3,284,388	+				-1.5
3,284,390	+				-0.3
3,284,406	-				+0.5