Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02904

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
3,227,259	+		MIT1002_02902	0.80	+0.1
3,227,261	-		MIT1002_02902	0.80	-0.1
3,227,313	-		MIT1002_02902	0.82	-0.4
3,227,443	-		MIT1002_02902	0.89	-0.8
3,227,452	+		MIT1002_02902	0.89	-1.4
3,227,452	+		MIT1002_02902	0.89	-0.1
3,227,467	+		MIT1002_02902	0.90	+0.6
3,227,491	+				+1.0
3,227,499	-				+0.4
3,227,499	-				+0.6
3,227,499	-				+0.3
3,227,719	-				+0.2
3,227,750	+				+0.5
3,227,800	-				-0.7
3,227,938	+		MIT1002_02903	0.22	+0.7
3,227,938	+		MIT1002_02903	0.22	-1.4
3,227,938	+		MIT1002_02903	0.22	+0.2
3,227,938	+		MIT1002_02903	0.22	+1.5
3,227,946	-		MIT1002_02903	0.24	-0.2
3,227,996	+		MIT1002_02903	0.38	+0.2
3,228,060	+		MIT1002_02903	0.55	+1.7
3,228,118	+		MIT1002_02903	0.71	-0.4
3,228,118	+		MIT1002_02903	0.71	+0.2
3,228,118	+		MIT1002_02903	0.71	-0.4
3,228,118	+		MIT1002_02903	0.71	-0.6
3,228,118	+		MIT1002_02903	0.71	+0.4
3,228,118	+		MIT1002_02903	0.71	+0.1
3,228,126	-		MIT1002_02903	0.73	-1.4
3,228,126	-		MIT1002_02903	0.73	-0.8
3,228,126	-		MIT1002_02903	0.73	-0.3
3,228,158	+		MIT1002_02903	0.82	-0.0
3,228,269	+		MIT1002_02904	0.33	+0.8
3,228,269	+		MIT1002_02904	0.33	+1.0
3,228,269	+		MIT1002_02904	0.33	+1.1
3,228,381	+				+1.4
3,228,389	-				-0.6
3,228,484	+				+0.4
3,228,492	-				-1.2
3,228,537	-				+0.2
3,228,552	+				+0.4
3,228,593	-		MIT1002_02905	0.15	-0.7
3,228,631	+		MIT1002_02905	0.21	+0.3
3,228,631	+		MIT1002_02905	0.21	+1.8
3,228,787	+		MIT1002_02905	0.45	+0.8
3,228,809	+		MIT1002_02905	0.48	-0.0
3,228,866	+		MIT1002_02905	0.57	+1.6
3,228,887	+		MIT1002_02905	0.60	+0.4
3,228,894	-		MIT1002_02905	0.61	+0.7
3,228,933	+		MIT1002_02905	0.67	+0.7
3,229,038	-		MIT1002_02905	0.83	-0.6
3,229,047	+		MIT1002_02905	0.84	-1.1
3,229,048	+		MIT1002_02905	0.84	+0.2
3,229,184	+				-0.1
3,229,196	+				-0.1
3,229,196	+				-1.3
3,229,196	+				-2.3
3,229,196	+				+2.2
3,229,204	+				-0.0
3,229,204	-				+0.5
3,229,204	-				-0.1
3,229,204	-				+0.6
3,229,204	-				-1.6
3,229,262	-		MIT1002_02906	0.10	+0.2
3,229,264	-		MIT1002_02906	0.11	-2.6
3,229,315	+		MIT1002_02906	0.21	-2.9
3,229,320	-		MIT1002_02906	0.22	-0.3