Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02628

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
2,923,242	+		MIT1002_02626	0.46	+1.9
2,923,251	+		MIT1002_02626	0.49	+0.2
2,923,259	-		MIT1002_02626	0.52	+0.0
2,923,279	-		MIT1002_02626	0.61	-0.6
2,923,347	+		MIT1002_02626	0.88	+2.1
2,923,355	-				-0.4
2,923,357	-				-0.4
2,923,460	-				-0.5
2,923,496	-				+0.5
2,923,522	-				-2.0
2,923,694	-		MIT1002_02627	0.24	+0.1
2,923,802	+		MIT1002_02627	0.43	+0.6
2,923,804	+		MIT1002_02627	0.43	+1.0
2,923,819	+		MIT1002_02627	0.46	-0.7
2,923,849	+		MIT1002_02627	0.51	+0.1
2,924,004	-		MIT1002_02627	0.78	+0.1
2,924,026	+		MIT1002_02627	0.82	-0.6
2,924,034	-		MIT1002_02627	0.83	+1.6
2,924,040	+		MIT1002_02627	0.84	-1.9
2,924,045	+		MIT1002_02627	0.85	-1.0
2,924,045	+		MIT1002_02627	0.85	+0.2
2,924,045	+		MIT1002_02627	0.85	+0.8
2,924,047	+		MIT1002_02627	0.86	+0.7
2,924,055	-		MIT1002_02627	0.87	+1.1
2,924,075	+				+0.9
2,924,081	-				-0.4
2,924,120	-				+0.5
2,924,178	-				-1.9
2,924,183	+				+0.4
2,924,191	-				+0.4
2,924,269	+		MIT1002_02628	0.14	-0.4
2,924,277	-		MIT1002_02628	0.18	-0.1
2,924,337	+		MIT1002_02628	0.48	+0.7
2,924,345	-		MIT1002_02628	0.51	-1.6
2,924,352	+		MIT1002_02628	0.55	-1.9
2,924,352	+		MIT1002_02628	0.55	+0.3
2,924,352	+		MIT1002_02628	0.55	-0.1
2,924,352	+		MIT1002_02628	0.55	-0.9
2,924,354	+		MIT1002_02628	0.56	+0.5
2,924,354	+		MIT1002_02628	0.56	+1.6
2,924,360	-		MIT1002_02628	0.59	+0.5
2,924,360	-		MIT1002_02628	0.59	-0.0
2,924,360	-		MIT1002_02628	0.59	+0.1
2,924,360	-		MIT1002_02628	0.59	+0.7
2,924,360	-		MIT1002_02628	0.59	+1.0
2,924,360	-		MIT1002_02628	0.59	+0.2
2,924,360	-		MIT1002_02628	0.59	+0.6
2,924,360	-		MIT1002_02628	0.59	-0.3
2,924,362	-		MIT1002_02628	0.60	-2.5
2,924,428	+				+0.5
2,924,440	+				+0.6
2,924,448	-				-0.1
2,924,448	-				-0.0
2,924,554	+				-0.9
2,924,554	+				-0.8
2,924,554	+				-0.3
2,924,554	+				-0.9
2,924,556	+				+1.7
2,924,562	-		MIT1002_02629	0.11	+1.0
2,924,562	-		MIT1002_02629	0.11	+1.2
2,924,562	-		MIT1002_02629	0.11	+0.1
2,924,562	-		MIT1002_02629	0.11	+0.9
2,924,597	-		MIT1002_02629	0.24	-2.3
2,924,632	+		MIT1002_02629	0.37	-1.6
2,924,640	-		MIT1002_02629	0.40	+1.1
2,924,657	+		MIT1002_02629	0.47	+2.1
2,924,686	+		MIT1002_02629	0.58	-0.4
2,924,696	+		MIT1002_02629	0.61	-0.4
2,924,704	-		MIT1002_02629	0.64	-2.5
2,924,721	+		MIT1002_02629	0.71	-2.2
2,924,801	-				-1.5
2,924,967	+		MIT1002_02630	0.64	-0.4
2,925,044	-				-0.1
2,925,059	+				+0.7
2,925,059	+				-0.2
2,925,067	-				+0.0
2,925,067	-				-2.9
2,925,079	+				+0.2
2,925,147	+				-0.6
2,925,157	+				-2.2
2,925,190	+				-0.7
2,925,227	-				-3.8
2,925,330	+				+1.1
2,925,333	+				-1.3
2,925,396	-				-2.0