Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02529

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
2,819,131	+				+0.8
2,819,139	-				+0.0
2,819,202	-				-0.9
2,819,276	-				-0.4
2,819,276	-				-2.3
2,819,296	-		MIT1002_02529	0.11	-0.6
2,819,327	-		MIT1002_02529	0.15	+0.3
2,819,387	-		MIT1002_02529	0.22	-3.4
2,819,539	+		MIT1002_02529	0.42	-2.2
2,819,554	-		MIT1002_02529	0.43	-1.6
2,819,572	-		MIT1002_02529	0.46	-1.9
2,819,614	+		MIT1002_02529	0.51	-0.7
2,819,732	+		MIT1002_02529	0.66	+0.5
2,819,737	+		MIT1002_02529	0.67	-2.3
2,819,745	+		MIT1002_02529	0.68	-1.2
2,819,745	-		MIT1002_02529	0.68	-1.6
2,819,745	-		MIT1002_02529	0.68	-3.1
2,819,781	-		MIT1002_02529	0.72	-2.9
2,819,797	+		MIT1002_02529	0.74	-0.1
2,819,837	-		MIT1002_02529	0.79	-1.8
2,819,841	-		MIT1002_02529	0.80	-1.1
2,819,882	+		MIT1002_02529	0.85	-3.0
2,819,959	-				-1.0
2,819,962	-				-2.0
2,819,962	-				+0.0
2,819,967	-				-0.1
2,819,981	+				-1.1
2,819,981	+				-0.5
2,820,006	+				-0.2
2,820,014	-				-0.2
2,820,014	-				+0.7
2,820,035	+				+0.6
2,820,043	-				-1.5
2,820,177	+				+0.6
2,820,252	+				+0.7
2,820,294	-				-0.2
2,820,295	+				-1.7
2,820,345	-				-0.1
2,820,352	-				+0.7
2,820,397	-				-0.7
2,820,404	-				-0.1
2,820,416	-				+0.8
2,820,453	-				-0.0
2,820,617	+				+0.6
2,820,617	-				-2.4
2,820,665	+				-0.1
2,820,730	+		MIT1002_02530	0.11	-2.1
2,820,795	-		MIT1002_02530	0.12	+0.8
2,820,950	+		MIT1002_02530	0.15	+0.4