Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02300

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
2,562,044	-		MIT1002_02299	0.19	+0.3
2,562,113	-		MIT1002_02299	0.27	-1.5
2,562,221	+		MIT1002_02299	0.39	+0.4
2,562,229	-		MIT1002_02299	0.39	-0.5
2,562,229	-		MIT1002_02299	0.39	+0.8
2,562,229	-		MIT1002_02299	0.39	-1.7
2,562,229	-		MIT1002_02299	0.39	-0.2
2,562,259	+		MIT1002_02299	0.43	+0.4
2,562,278	+		MIT1002_02299	0.45	+0.6
2,562,301	-		MIT1002_02299	0.47	-0.6
2,562,361	+		MIT1002_02299	0.54	-0.4
2,562,383	-		MIT1002_02299	0.56	+0.6
2,562,393	-		MIT1002_02299	0.57	+0.0
2,562,393	-		MIT1002_02299	0.57	+1.0
2,562,395	+		MIT1002_02299	0.58	+0.9
2,562,401	+		MIT1002_02299	0.58	-1.1
2,562,403	-		MIT1002_02299	0.58	+0.2
2,562,414	-		MIT1002_02299	0.60	+0.1
2,562,520	-		MIT1002_02299	0.71	+0.6
2,562,557	-		MIT1002_02299	0.75	+0.4
2,562,558	-		MIT1002_02299	0.75	-0.2
2,562,577	-		MIT1002_02299	0.77	-0.4
2,562,582	-		MIT1002_02299	0.78	-1.0
2,562,594	+		MIT1002_02299	0.79	-0.9
2,562,626	-		MIT1002_02299	0.83	+0.8
2,562,660	-		MIT1002_02299	0.86	+0.3
2,562,694	+				+1.5
2,562,704	-				-2.4
2,562,751	+				+0.5
2,562,773	-				-0.4
2,562,818	-				-1.6
2,562,818	-				-0.5
2,562,825	+				-0.6
2,562,833	-				+0.8
2,562,960	-		MIT1002_02300	0.23	+0.3
2,562,968	+		MIT1002_02300	0.25	-1.0
2,563,009	-		MIT1002_02300	0.36	+0.4
2,563,133	+		MIT1002_02300	0.67	+0.4
2,563,136	-		MIT1002_02300	0.68	-0.7
2,563,175	+		MIT1002_02300	0.78	-1.4
2,563,175	+		MIT1002_02300	0.78	-0.7
2,563,175	+		MIT1002_02300	0.78	+0.0
2,563,198	-		MIT1002_02300	0.84	+1.2
2,563,229	+				-0.2
2,563,242	-				-0.2
2,563,251	-				+1.3
2,563,492	+				-0.2
2,563,521	+				-0.4
2,563,577	-				-0.6
2,563,828	+		MIT1002_02301	0.31	-0.1
2,563,908	+		MIT1002_02301	0.38	+1.8
2,563,957	+		MIT1002_02301	0.43	+0.8
2,564,009	-		MIT1002_02301	0.47	-1.3
2,564,012	+		MIT1002_02301	0.47	+0.5
2,564,182	+		MIT1002_02301	0.62	+0.9
2,564,182	+		MIT1002_02301	0.62	+0.3
2,564,186	+		MIT1002_02301	0.63	+0.3
2,564,190	-		MIT1002_02301	0.63	-1.0
2,564,213	-		MIT1002_02301	0.65	+0.7