Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02182

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
2,438,059	-				-0.9
2,438,059	-				-0.4
2,438,059	-				-2.2
2,438,071	-				+0.9
2,438,168	-				-2.4
2,438,168	-				+0.5
2,438,168	-				+0.4
2,438,168	-				-0.2
2,438,234	-				-1.6
2,438,252	-				+0.2
2,438,342	+		MIT1002_02181	0.16	-0.3
2,438,347	+		MIT1002_02181	0.17	+0.6
2,438,450	+		MIT1002_02181	0.38	-0.7
2,438,499	-		MIT1002_02181	0.49	+1.3
2,438,558	+		MIT1002_02181	0.61	+0.7
2,438,590	+		MIT1002_02181	0.67	+0.1
2,438,590	+		MIT1002_02181	0.67	+1.3
2,438,598	-		MIT1002_02181	0.69	+0.2
2,438,627	+		MIT1002_02181	0.75	+0.7
2,438,913	+		MIT1002_02182	0.82	-1.1
2,438,928	+				-0.6
2,438,928	+				+0.2
2,438,928	+				+0.9
2,438,933	-				-0.1
2,439,161	+		MIT1002_02183	0.20	-0.5
2,439,195	+		MIT1002_02183	0.23	+1.0
2,439,204	+		MIT1002_02183	0.24	+0.5
2,439,204	+		MIT1002_02183	0.24	-0.9
2,439,204	+		MIT1002_02183	0.24	-2.1
2,439,211	-		MIT1002_02183	0.24	+1.2
2,439,212	-		MIT1002_02183	0.25	-1.1
2,439,212	-		MIT1002_02183	0.25	+0.2
2,439,212	-		MIT1002_02183	0.25	+1.4
2,439,212	-		MIT1002_02183	0.25	-0.1
2,439,212	-		MIT1002_02183	0.25	+0.3
2,439,239	-		MIT1002_02183	0.27	+0.9
2,439,272	-		MIT1002_02183	0.30	+1.7
2,439,357	+		MIT1002_02183	0.37	+0.5
2,439,385	-		MIT1002_02183	0.40	-4.3
2,439,435	-		MIT1002_02183	0.44	+2.7
2,439,465	+		MIT1002_02183	0.47	+0.1
2,439,606	+		MIT1002_02183	0.59	+1.5
2,439,619	-		MIT1002_02183	0.60	+1.3
2,439,648	+		MIT1002_02183	0.63	-1.1
2,439,656	-		MIT1002_02183	0.64	-1.2
2,439,686	-		MIT1002_02183	0.66	-0.5
2,439,703	-		MIT1002_02183	0.68	+0.5
2,439,763	+		MIT1002_02183	0.73	+2.1
2,439,780	+		MIT1002_02183	0.75	+1.3
2,439,783	-		MIT1002_02183	0.75	-0.8
2,439,788	-		MIT1002_02183	0.75	-0.1
2,439,788	-		MIT1002_02183	0.75	+1.9
2,439,788	-		MIT1002_02183	0.75	+0.2
2,439,818	+		MIT1002_02183	0.78	-0.3