Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02111

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
2,370,436	-		MIT1002_02110	0.28	+0.8
2,370,528	-		MIT1002_02110	0.38	-0.6
2,370,541	-		MIT1002_02110	0.39	+0.7
2,370,541	-		MIT1002_02110	0.39	+0.4
2,370,541	-		MIT1002_02110	0.39	+0.4
2,370,591	+		MIT1002_02110	0.44	-1.3
2,370,593	+		MIT1002_02110	0.44	+0.2
2,370,593	+		MIT1002_02110	0.44	+0.1
2,370,629	+		MIT1002_02110	0.48	+2.6
2,370,641	+		MIT1002_02110	0.49	+0.7
2,370,658	+		MIT1002_02110	0.50	-0.2
2,370,714	+		MIT1002_02110	0.56	-0.9
2,370,721	+		MIT1002_02110	0.57	+0.4
2,370,721	+		MIT1002_02110	0.57	-0.4
2,370,996	-		MIT1002_02110	0.84	-0.5
2,371,021	+		MIT1002_02110	0.87	+1.3
2,371,101	+				-0.7
2,371,286	+				+1.3
2,371,314	-				-0.8
2,371,344	+				+0.4
2,371,344	+				-0.9
2,371,353	-				-0.2
2,371,387	+				-0.9
2,371,441	-		MIT1002_02111	0.10	+0.4
2,371,465	-		MIT1002_02111	0.13	-0.3
2,371,480	+		MIT1002_02111	0.15	-0.5
2,371,488	-		MIT1002_02111	0.15	-0.4
2,371,530	+		MIT1002_02111	0.20	-0.2
2,371,573	-		MIT1002_02111	0.24	-1.6
2,371,575	+		MIT1002_02111	0.25	+2.9
2,371,628	+		MIT1002_02111	0.30	+0.3
2,371,688	+		MIT1002_02111	0.37	-2.1
2,371,739	+		MIT1002_02111	0.42	-0.3
2,371,747	-		MIT1002_02111	0.43	-1.3
2,371,777	-		MIT1002_02111	0.46	+0.0
2,371,835	+		MIT1002_02111	0.52	-0.5
2,371,835	+		MIT1002_02111	0.52	-0.1
2,371,839	-		MIT1002_02111	0.53	-0.6
2,371,891	-		MIT1002_02111	0.58	+0.4
2,371,921	-		MIT1002_02111	0.62	+0.5
2,371,935	+		MIT1002_02111	0.63	+0.9
2,371,957	-		MIT1002_02111	0.65	-0.1
2,372,050	+		MIT1002_02111	0.75	-0.2
2,372,050	+		MIT1002_02111	0.75	-1.1
2,372,050	+		MIT1002_02111	0.75	+0.3
2,372,050	+		MIT1002_02111	0.75	+2.6
2,372,058	-		MIT1002_02111	0.76	+0.5
2,372,058	-		MIT1002_02111	0.76	+0.6
2,372,071	+		MIT1002_02111	0.78	-0.2
2,372,079	-		MIT1002_02111	0.79	-0.3
2,372,079	-		MIT1002_02111	0.79	+1.1
2,372,079	-		MIT1002_02111	0.79	+0.1
2,372,154	+		MIT1002_02111	0.87	-0.0
2,372,174	+		MIT1002_02111	0.89	-2.3
2,372,174	+		MIT1002_02111	0.89	-0.0
2,372,210	-				+1.3
2,372,290	-				+1.4
2,372,384	+		MIT1002_02112	0.41	+0.7
2,372,491	+		MIT1002_02112	0.88	+1.0
2,372,501	+				+0.9
2,372,503	+				+0.2
2,372,511	-				+0.4
2,372,518	+				-1.0
2,372,526	-				+0.7
2,372,526	-				+0.6
2,372,528	+				+0.5
2,372,528	+				-0.4
2,372,583	-				-0.1
2,372,718	+		MIT1002_02113	0.19	+0.4
2,372,719	+		MIT1002_02113	0.19	+0.7
2,372,967	+		MIT1002_02113	0.68	-0.1
2,372,977	+		MIT1002_02113	0.70	-0.5
2,372,977	+		MIT1002_02113	0.70	+0.6
2,372,977	+		MIT1002_02113	0.70	-0.7
2,372,977	+		MIT1002_02113	0.70	-0.3
2,372,977	+		MIT1002_02113	0.70	+1.9
2,372,977	+		MIT1002_02113	0.70	-0.9
2,372,977	+		MIT1002_02113	0.70	+0.2
2,372,977	+		MIT1002_02113	0.70	-0.1
2,372,977	+		MIT1002_02113	0.70	-1.5
2,372,977	+		MIT1002_02113	0.70	+0.7
2,372,977	+		MIT1002_02113	0.70	-0.3
2,372,977	+		MIT1002_02113	0.70	-0.1
2,372,985	-		MIT1002_02113	0.71	-1.7
2,372,985	-		MIT1002_02113	0.71	-0.5
2,372,985	-		MIT1002_02113	0.71	-0.5
2,372,985	-		MIT1002_02113	0.71	+2.0
2,372,985	-		MIT1002_02113	0.71	-0.3
2,372,985	-		MIT1002_02113	0.71	-1.4
2,372,989	-		MIT1002_02113	0.72	+1.6
2,372,994	-		MIT1002_02113	0.73	-1.4
2,373,038	-		MIT1002_02113	0.82	+0.8
2,373,126	-				-0.3
2,373,157	-				-0.8
2,373,157	-				+0.7
2,373,178	+				+0.2
2,373,240	-				+1.6
2,373,253	+				+1.5
2,373,262	-				+0.6