Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01965

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
2,195,401	-				-0.1
2,195,533	+				+0.4
2,195,569	-		MIT1002_01965	0.11	-1.7
2,195,646	+		MIT1002_01965	0.21	-1.4
2,195,695	+		MIT1002_01965	0.28	-2.0
2,195,695	+		MIT1002_01965	0.28	+0.5
2,195,695	+		MIT1002_01965	0.28	-1.9
2,195,703	-		MIT1002_01965	0.29	-0.3
2,195,731	+		MIT1002_01965	0.33	-0.0
2,195,769	+		MIT1002_01965	0.38	+0.3
2,195,776	-		MIT1002_01965	0.39	-2.0
2,195,914	-		MIT1002_01965	0.57	-0.7
2,196,047	-		MIT1002_01965	0.75	-0.7
2,196,056	+		MIT1002_01965	0.76	+0.3
2,196,075	-		MIT1002_01965	0.79	+1.1
2,196,077	+		MIT1002_01965	0.79	-2.1
2,196,093	+		MIT1002_01965	0.81	+0.0
2,196,274	-				+1.7
2,196,307	-				+0.2
2,196,315	+				-1.5
2,196,468	-				-0.2
2,196,474	+				+1.2
2,196,474	+				+1.1
2,196,479	+				+1.3
2,196,479	+				+0.3
2,196,482	-				+1.8
2,196,487	-				+1.0
2,196,544	-				+0.9
2,196,583	+				-1.0
2,196,595	+				+1.7
2,196,601	-				+1.2
2,196,601	-				+3.3
2,196,603	-				+0.7
2,196,615	-				-0.4
2,196,618	+				+0.3
2,196,707	-				+1.6
2,196,835	+		MIT1002_01966	0.11	-0.6
2,196,947	+		MIT1002_01966	0.15	-0.4
2,196,947	+		MIT1002_01966	0.15	+0.2
2,196,953	+		MIT1002_01966	0.15	-0.5
2,196,955	-		MIT1002_01966	0.16	+0.8
2,196,968	+		MIT1002_01966	0.16	+0.3
2,196,968	+		MIT1002_01966	0.16	-0.1
2,196,969	-		MIT1002_01966	0.16	-1.0
2,196,976	-		MIT1002_01966	0.16	+0.9
2,196,976	-		MIT1002_01966	0.16	-0.7
2,197,044	-		MIT1002_01966	0.19	+0.2
2,197,049	-		MIT1002_01966	0.19	-0.3
2,197,094	+		MIT1002_01966	0.21	-0.0
2,197,097	-		MIT1002_01966	0.21	+0.8
2,197,097	-		MIT1002_01966	0.21	-0.8
2,197,151	+		MIT1002_01966	0.23	+0.2
2,197,151	+		MIT1002_01966	0.23	-0.1
2,197,159	-		MIT1002_01966	0.23	+0.9
2,197,159	-		MIT1002_01966	0.23	+2.2
2,197,159	-		MIT1002_01966	0.23	-0.5
2,197,159	-		MIT1002_01966	0.23	+1.4
2,197,159	-		MIT1002_01966	0.23	-0.1
2,197,171	+		MIT1002_01966	0.24	+0.2
2,197,179	-		MIT1002_01966	0.24	+0.4
2,197,197	-		MIT1002_01966	0.25	-1.2
2,197,210	-		MIT1002_01966	0.25	+0.4