Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01685

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
1,870,328	-		MIT1002_01684	0.34	-0.2
1,870,339	+		MIT1002_01684	0.35	+0.7
1,870,339	+		MIT1002_01684	0.35	-0.2
1,870,346	-		MIT1002_01684	0.35	-1.8
1,870,347	-		MIT1002_01684	0.35	-0.4
1,870,352	-		MIT1002_01684	0.36	-1.9
1,870,367	+		MIT1002_01684	0.37	+0.3
1,870,367	+		MIT1002_01684	0.37	+0.8
1,870,375	-		MIT1002_01684	0.37	-0.1
1,870,375	-		MIT1002_01684	0.37	+0.7
1,870,377	-		MIT1002_01684	0.38	-0.9
1,870,438	+		MIT1002_01684	0.42	-0.6
1,870,469	+		MIT1002_01684	0.44	+0.5
1,870,545	-		MIT1002_01684	0.50	+0.3
1,870,598	-		MIT1002_01684	0.54	+1.4
1,870,598	-		MIT1002_01684	0.54	-0.4
1,870,598	-		MIT1002_01684	0.54	+0.2
1,870,628	+		MIT1002_01684	0.56	-0.2
1,870,645	+		MIT1002_01684	0.58	-0.0
1,870,653	-		MIT1002_01684	0.58	+2.6
1,870,704	-		MIT1002_01684	0.62	+0.5
1,870,704	-		MIT1002_01684	0.62	-2.0
1,870,758	+		MIT1002_01684	0.66	-2.6
1,870,813	+		MIT1002_01684	0.70	-1.1
1,870,848	-		MIT1002_01684	0.73	+1.2
1,870,852	+		MIT1002_01684	0.73	+0.9
1,870,978	+		MIT1002_01684	0.82	-0.1
1,871,035	+		MIT1002_01684	0.86	+1.5
1,871,035	+		MIT1002_01684	0.86	+1.2
1,871,035	+		MIT1002_01684	0.86	-1.1
1,871,035	+		MIT1002_01684	0.86	-0.4
1,871,035	+		MIT1002_01684	0.86	+0.3
1,871,098	+				+1.8
1,871,098	+				-0.8
1,871,106	-				-1.4
1,871,108	+				+0.3
1,871,228	+				+0.9
1,871,258	+				+0.1
1,871,329	-				+1.1
1,871,399	+				-0.1
1,871,407	-				+0.8
1,871,407	-				-1.1
1,871,524	-				-0.1
1,871,547	-				-0.4
1,871,549	+				+1.6
1,871,553	-				-0.8
1,871,602	+				-0.8
1,871,679	-				+0.2
1,871,690	+				-1.7
1,871,700	+				+0.9
1,871,700	+				-2.1
1,871,708	-				+0.2
1,871,708	-				-1.7
1,871,734	+		MIT1002_01685	0.10	-0.4
1,871,734	+		MIT1002_01685	0.10	-0.4
1,871,754	+		MIT1002_01685	0.11	-1.7
1,871,768	+		MIT1002_01685	0.11	+0.9
1,871,775	+		MIT1002_01685	0.11	+0.2
1,871,901	+		MIT1002_01685	0.15	-0.7
1,871,901	+		MIT1002_01685	0.15	-0.5
1,871,902	-		MIT1002_01685	0.15	-0.9
1,871,994	-		MIT1002_01685	0.17	+0.1
1,872,152	-		MIT1002_01685	0.21	-2.7
1,872,199	+		MIT1002_01685	0.22	-0.4
1,872,240	-		MIT1002_01685	0.23	-0.6
1,872,250	-		MIT1002_01685	0.23	-1.5
1,872,351	+		MIT1002_01685	0.26	-0.4
1,872,351	+		MIT1002_01685	0.26	-2.2
1,872,363	+		MIT1002_01685	0.26	+0.8
1,872,441	-		MIT1002_01685	0.28	-0.2
1,872,520	+		MIT1002_01685	0.30	+0.3
1,872,587	-		MIT1002_01685	0.32	-1.8
1,872,620	-		MIT1002_01685	0.33	+0.4
1,872,870	-		MIT1002_01685	0.39	-0.4
1,872,904	-		MIT1002_01685	0.40	-0.9
1,872,913	-		MIT1002_01685	0.40	-0.2
1,872,968	-		MIT1002_01685	0.41	-0.6
1,872,973	-		MIT1002_01685	0.41	+1.8
1,873,080	-		MIT1002_01685	0.44	-0.2
1,873,087	-		MIT1002_01685	0.44	-0.3
1,873,088	-		MIT1002_01685	0.44	-0.7
1,873,116	-		MIT1002_01685	0.45	+1.2
1,873,366	+		MIT1002_01685	0.51	+1.7
1,873,367	+		MIT1002_01685	0.51	-0.7
1,873,367	+		MIT1002_01685	0.51	-0.7
1,873,367	+		MIT1002_01685	0.51	+0.3
1,873,383	+		MIT1002_01685	0.52	-0.3
1,873,424	+		MIT1002_01685	0.53	-1.8
1,873,432	-		MIT1002_01685	0.53	+1.9
1,873,478	-		MIT1002_01685	0.54	-1.8
1,873,478	-		MIT1002_01685	0.54	-2.0
1,873,484	-		MIT1002_01685	0.54	+0.9
1,873,484	-		MIT1002_01685	0.54	-1.9
1,873,516	-		MIT1002_01685	0.55	+1.5
1,873,523	+		MIT1002_01685	0.55	+0.1
1,873,523	+		MIT1002_01685	0.55	+1.2
1,873,523	+		MIT1002_01685	0.55	+0.1
1,873,531	-		MIT1002_01685	0.55	-0.4
1,873,531	-		MIT1002_01685	0.55	-1.1
1,873,542	+		MIT1002_01685	0.56	-0.0
1,873,546	-		MIT1002_01685	0.56	+0.1
1,873,586	-		MIT1002_01685	0.57	+0.8
1,873,603	-		MIT1002_01685	0.57	-0.3
1,873,655	+		MIT1002_01685	0.59	-1.2
1,873,891	+		MIT1002_01685	0.64	+0.5
1,873,966	-		MIT1002_01685	0.66	+1.1
1,873,966	-		MIT1002_01685	0.66	-0.6
1,873,985	-		MIT1002_01685	0.67	-0.4
1,874,009	+		MIT1002_01685	0.67	+0.1
1,874,025	+		MIT1002_01685	0.68	+1.5
1,874,039	-		MIT1002_01685	0.68	-0.1
1,874,087	+		MIT1002_01685	0.69	-0.7
1,874,093	+		MIT1002_01685	0.69	-0.8
1,874,093	+		MIT1002_01685	0.69	-1.1
1,874,093	+		MIT1002_01685	0.69	-0.2
1,874,117	-		MIT1002_01685	0.70	+0.9
1,874,117	-		MIT1002_01685	0.70	+1.5
1,874,150	-		MIT1002_01685	0.71	-1.1
1,874,210	-		MIT1002_01685	0.72	+1.6
1,874,288	+		MIT1002_01685	0.74	-1.7
1,874,296	-		MIT1002_01685	0.75	-1.9
1,874,296	-		MIT1002_01685	0.75	-2.4
1,874,308	+		MIT1002_01685	0.75	-0.4
1,874,371	-		MIT1002_01685	0.76	-0.8
1,874,378	+		MIT1002_01685	0.77	+0.7
1,874,386	-		MIT1002_01685	0.77	-0.1
1,874,386	-		MIT1002_01685	0.77	+1.0
1,874,386	-		MIT1002_01685	0.77	+1.3
1,874,386	-		MIT1002_01685	0.77	-0.5
1,874,386	-		MIT1002_01685	0.77	-3.2
1,874,388	+		MIT1002_01685	0.77	-2.1
1,874,393	+		MIT1002_01685	0.77	+0.8
1,874,393	+		MIT1002_01685	0.77	-1.0
1,874,393	+		MIT1002_01685	0.77	+1.6
1,874,398	+		MIT1002_01685	0.77	-0.1
1,874,401	-		MIT1002_01685	0.77	-0.9
1,874,401	-		MIT1002_01685	0.77	+0.7
1,874,401	-		MIT1002_01685	0.77	-1.5
1,874,401	-		MIT1002_01685	0.77	+0.2
1,874,401	-		MIT1002_01685	0.77	+0.2
1,874,406	-		MIT1002_01685	0.77	-1.4
1,874,422	-		MIT1002_01685	0.78	-0.7
1,874,518	-		MIT1002_01685	0.80	+1.4
1,874,614	-		MIT1002_01685	0.83	-1.1
1,874,828	+		MIT1002_01685	0.88	-1.4
1,874,850	+		MIT1002_01685	0.88	+1.7
1,874,863	+		MIT1002_01685	0.89	+0.8
1,874,871	-		MIT1002_01685	0.89	-0.4
1,874,871	-		MIT1002_01685	0.89	+0.2
1,874,893	+		MIT1002_01685	0.89	+0.9
1,874,894	+		MIT1002_01685	0.90	-0.4
1,874,894	+		MIT1002_01685	0.90	+0.3
1,874,894	+		MIT1002_01685	0.90	-0.2
1,874,895	-		MIT1002_01685	0.90	+0.8
1,874,902	-		MIT1002_01685	0.90	-2.7
1,874,933	+				+0.0
1,874,936	+				-0.6
1,874,960	+				+0.3
1,874,960	+				+2.4
1,874,960	+				-1.7
1,874,966	-				-0.6
1,874,970	+				-0.3
1,875,032	+				+0.3
1,875,032	+				+1.5
1,875,062	-				-0.4
1,875,074	+				+0.5
1,875,074	+				-0.6
1,875,128	-				-1.8
1,875,157	-				+0.1
1,875,186	+				+1.8
1,875,282	+				+0.6
1,875,282	+				+0.5
1,875,289	+				-2.1
1,875,289	+				-1.9
1,875,324	+				-0.0
1,875,326	+				+1.0
1,875,326	+				-0.8
1,875,326	+				+0.0
1,875,334	-				-0.2
1,875,344	+				+0.8
1,875,371	-				+0.2
1,875,478	+				+0.6
1,875,522	-				+1.2
1,875,530	-				-0.4
1,875,540	+				-0.3
1,875,658	+		MIT1002_01686	0.29	-0.1
1,875,674	+		MIT1002_01686	0.34	-2.7
1,875,696	+		MIT1002_01686	0.42	-1.4
1,875,731	+		MIT1002_01686	0.53	-1.0
1,875,732	-		MIT1002_01686	0.53	-0.7
1,875,732	-		MIT1002_01686	0.53	-0.1
1,875,800	-		MIT1002_01686	0.76	-0.3
1,875,804	+		MIT1002_01686	0.77	-0.8
1,875,804	+		MIT1002_01686	0.77	-0.4
1,875,804	+		MIT1002_01686	0.77	-1.7
1,875,812	-		MIT1002_01686	0.80	-0.2
1,875,838	+		MIT1002_01686	0.88	-0.7
1,875,838	+		MIT1002_01686	0.88	-1.2
1,875,879	-				-0.9
1,875,946	-				-1.4
1,875,990	+				+1.1
1,875,990	+				-1.3
1,875,998	-				+0.6
1,876,047	+				-0.8
1,876,096	-				-0.4
1,876,173	+				+0.1
1,876,173	+				+0.8
1,876,181	-				-1.9
1,876,245	+		MIT1002_01687	0.34	+1.2
1,876,270	+		MIT1002_01687	0.44	-1.5