Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01635

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
1,804,241	-		MIT1002_01634	0.73	+0.9
1,804,242	-		MIT1002_01634	0.73	+1.2
1,804,243	+		MIT1002_01634	0.73	-2.3
1,804,251	-		MIT1002_01634	0.73	+0.6
1,804,265	+		MIT1002_01634	0.74	-1.0
1,804,265	+		MIT1002_01634	0.74	-0.4
1,804,273	-		MIT1002_01634	0.75	-0.5
1,804,273	-		MIT1002_01634	0.75	-0.8
1,804,275	+		MIT1002_01634	0.75	+2.1
1,804,283	-		MIT1002_01634	0.75	-1.1
1,804,283	-		MIT1002_01634	0.75	-0.3
1,804,283	-		MIT1002_01634	0.75	+2.3
1,804,283	-		MIT1002_01634	0.75	+0.9
1,804,284	-		MIT1002_01634	0.75	-0.6
1,804,289	+		MIT1002_01634	0.75	+1.0
1,804,297	-		MIT1002_01634	0.76	+0.8
1,804,297	-		MIT1002_01634	0.76	-0.2
1,804,297	-		MIT1002_01634	0.76	-1.0
1,804,298	-		MIT1002_01634	0.76	-0.4
1,804,302	+		MIT1002_01634	0.76	-0.2
1,804,302	+		MIT1002_01634	0.76	+0.1
1,804,310	-		MIT1002_01634	0.77	+0.4
1,804,318	-		MIT1002_01634	0.77	+0.9
1,804,335	+		MIT1002_01634	0.78	-0.5
1,804,343	+		MIT1002_01634	0.78	+0.3
1,804,343	+		MIT1002_01634	0.78	-0.3
1,804,343	+		MIT1002_01634	0.78	-0.4
1,804,348	+		MIT1002_01634	0.79	-2.2
1,804,348	-		MIT1002_01634	0.79	+1.0
1,804,350	+		MIT1002_01634	0.79	+0.5
1,804,350	+		MIT1002_01634	0.79	+1.7
1,804,350	+		MIT1002_01634	0.79	+0.5
1,804,351	-		MIT1002_01634	0.79	-0.1
1,804,351	-		MIT1002_01634	0.79	+1.0
1,804,351	-		MIT1002_01634	0.79	+0.1
1,804,351	-		MIT1002_01634	0.79	+0.9
1,804,353	-		MIT1002_01634	0.79	-0.7
1,804,353	-		MIT1002_01634	0.79	-0.6
1,804,353	-		MIT1002_01634	0.79	+0.4
1,804,360	+		MIT1002_01634	0.79	+0.1
1,804,360	+		MIT1002_01634	0.79	+1.0
1,804,360	+		MIT1002_01634	0.79	-0.5
1,804,360	+		MIT1002_01634	0.79	+0.4
1,804,360	+		MIT1002_01634	0.79	-0.2
1,804,360	+		MIT1002_01634	0.79	+0.1
1,804,360	+		MIT1002_01634	0.79	+1.4
1,804,360	+		MIT1002_01634	0.79	+1.1
1,804,360	+		MIT1002_01634	0.79	-0.1
1,804,360	+		MIT1002_01634	0.79	-0.7
1,804,360	+		MIT1002_01634	0.79	+0.6
1,804,360	+		MIT1002_01634	0.79	+1.8
1,804,360	+		MIT1002_01634	0.79	+0.8
1,804,360	+		MIT1002_01634	0.79	+0.3
1,804,360	+		MIT1002_01634	0.79	+0.9
1,804,360	+		MIT1002_01634	0.79	-0.5
1,804,360	+		MIT1002_01634	0.79	+0.6
1,804,360	+		MIT1002_01634	0.79	-0.6
1,804,361	+		MIT1002_01634	0.79	-0.6
1,804,361	-		MIT1002_01634	0.79	+0.7
1,804,363	-		MIT1002_01634	0.79	+0.3
1,804,368	-		MIT1002_01634	0.80	-1.4
1,804,368	-		MIT1002_01634	0.80	+0.7
1,804,368	-		MIT1002_01634	0.80	-0.2
1,804,368	-		MIT1002_01634	0.80	+1.8
1,804,368	-		MIT1002_01634	0.80	-0.7
1,804,368	-		MIT1002_01634	0.80	-1.4
1,804,368	-		MIT1002_01634	0.80	-0.1
1,804,368	-		MIT1002_01634	0.80	+0.0
1,804,368	-		MIT1002_01634	0.80	+0.3
1,804,368	-		MIT1002_01634	0.80	+1.1
1,804,368	-		MIT1002_01634	0.80	+0.3
1,804,368	-		MIT1002_01634	0.80	-2.3
1,804,368	-		MIT1002_01634	0.80	-0.3
1,804,368	-		MIT1002_01634	0.80	-2.8
1,804,368	-		MIT1002_01634	0.80	-2.2
1,804,368	-		MIT1002_01634	0.80	-0.3
1,804,368	-		MIT1002_01634	0.80	-1.7
1,804,369	-		MIT1002_01634	0.80	-0.0
1,804,422	+		MIT1002_01634	0.83	-1.3
1,804,439	-		MIT1002_01634	0.83	+1.9
1,804,494	-		MIT1002_01634	0.86	-0.4
1,804,498	+		MIT1002_01634	0.87	+0.9
1,804,506	-		MIT1002_01634	0.87	-0.2
1,804,525	+		MIT1002_01634	0.88	-0.9
1,804,594	+				+0.0
1,804,626	-				+1.9
1,804,636	+				+1.9
1,804,651	+				-0.8
1,804,658	+				+0.5
1,804,658	+				-1.5
1,804,658	+				+1.0
1,804,659	-				-2.8
1,804,665	+				+0.6
1,804,665	+				-0.9
1,804,666	-				+0.9
1,804,666	-				-1.2
1,804,666	-				+0.9
1,804,666	-				+0.1
1,804,670	+				+1.1
1,804,672	-				-1.1
1,804,678	-				+0.5
1,804,681	+				+0.8
1,804,681	+				-0.4
1,804,689	-				+0.3
1,804,693	+				-1.1
1,804,693	+				+0.1
1,804,693	+				+0.6
1,804,693	+				-0.5
1,804,693	+				-1.1
1,804,694	-				-0.2
1,804,696	+				+1.9
1,804,696	+				-0.2
1,804,696	+				+0.5
1,804,701	-				+1.5
1,804,701	-				-0.9
1,804,701	-				+0.4
1,804,701	-				+0.6
1,804,703	+				+0.6
1,804,704	-				+0.5
1,804,704	-				+0.4
1,804,704	-				+0.9
1,804,704	-				-1.0
1,804,717	+				-1.7
1,804,718	+				-0.5
1,804,718	+				+0.2
1,804,718	+				-0.7
1,804,718	+				+0.1
1,804,718	+				+0.5
1,804,725	-				-1.0
1,804,726	-				+0.3
1,804,726	-				-1.9
1,804,726	-				+0.4
1,804,791	+				+0.1
1,804,797	+				-0.8
1,804,797	+				-0.3
1,804,797	+				-1.0
1,804,797	+				+0.9
1,804,797	+				+0.4
1,804,797	+				-1.9
1,804,797	+				+1.3
1,804,797	+				+0.6
1,804,799	-				+0.5
1,804,805	+				-0.9
1,804,805	-				-1.8
1,804,805	-				-0.3
1,804,805	-				+0.8
1,804,805	-				+0.2
1,804,805	-				+0.3
1,804,805	-				+0.0
1,804,805	-				+0.3
1,804,805	-				+0.2
1,804,805	-				+0.6
1,804,805	-				-1.0
1,804,805	-				+0.3
1,804,805	-				-0.7
1,804,805	-				+1.0
1,804,805	-				+0.2
1,804,805	-				+0.2
1,804,805	-				+0.6
1,804,810	-				+0.6
1,804,810	-				+2.1
1,804,812	+				+0.3
1,804,820	-				+0.9
1,804,820	-				-0.7
1,804,849	+				-0.5
1,804,849	+				+0.3
1,804,849	+				+0.1
1,804,856	+				-0.5
1,804,857	-				+0.5
1,804,857	-				+1.1
1,804,857	-				+0.4
1,804,864	+				+0.6
1,804,864	-				+0.2
1,804,864	-				-0.5
1,804,890	-				+2.3
1,804,910	-				+1.5
1,804,912	-				-0.1
1,804,912	-				-0.2
1,804,915	-				-0.4
1,804,915	-				-1.3
1,804,915	-				+0.8
1,804,915	-				-2.0
1,804,920	-				+0.2
1,804,920	-				-0.8
1,804,920	-				-0.3
1,804,920	-				-1.0
1,804,935	+				-0.6
1,804,959	+				+0.2
1,804,960	+				-0.2
1,804,960	+				+1.7
1,804,973	-				+0.1
1,804,974	-				+0.3
1,804,992	+				+0.5
1,805,004	+				-0.5
1,805,079	+				-0.1
1,805,084	+				+0.6
1,805,092	-				-0.3
1,805,120	+				+0.2
1,805,120	-				-0.5
1,805,128	-				-1.2
1,805,138	+				+0.1
1,805,155	+				+0.7
1,805,155	+				-0.2
1,805,155	+				+1.0
1,805,155	+				-0.7
1,805,155	+				-2.0
1,805,155	+				+0.9
1,805,155	+				+0.5
1,805,155	+				+1.1
1,805,155	+				-0.2
1,805,155	+				+0.8
1,805,156	-				+1.3
1,805,156	-				+0.1
1,805,163	-				-1.1
1,805,163	-				+0.9
1,805,163	-				-0.1
1,805,163	-				+0.5
1,805,165	+				-1.1
1,805,181	-				-2.3
1,805,201	-				-1.7
1,805,219	+				-0.3
1,805,249	+		MIT1002_01635	0.13	+0.4
1,805,252	-		MIT1002_01635	0.14	-0.9
1,805,259	+		MIT1002_01635	0.15	+0.2
1,805,259	+		MIT1002_01635	0.15	-0.5
1,805,261	+		MIT1002_01635	0.15	-0.4
1,805,267	-		MIT1002_01635	0.16	-2.5
1,805,269	-		MIT1002_01635	0.16	+1.2
1,805,285	+		MIT1002_01635	0.18	-0.2
1,805,285	+		MIT1002_01635	0.18	+0.1
1,805,293	-		MIT1002_01635	0.19	-0.1
1,805,293	-		MIT1002_01635	0.19	+1.6
1,805,293	-		MIT1002_01635	0.19	+0.5
1,805,293	-		MIT1002_01635	0.19	-0.2
1,805,295	+		MIT1002_01635	0.19	+0.0
1,805,303	-		MIT1002_01635	0.20	+0.3
1,805,303	-		MIT1002_01635	0.20	-3.1
1,805,308	+		MIT1002_01635	0.20	+0.8
1,805,344	-		MIT1002_01635	0.25	+0.9
1,805,392	+		MIT1002_01635	0.30	-0.2
1,805,401	+		MIT1002_01635	0.32	-0.1
1,805,401	+		MIT1002_01635	0.32	+0.1
1,805,566	+		MIT1002_01635	0.51	+2.1
1,805,574	+		MIT1002_01635	0.52	+0.8
1,805,574	+		MIT1002_01635	0.52	-0.1
1,805,580	-		MIT1002_01635	0.53	-1.4
1,805,580	-		MIT1002_01635	0.53	+1.3
1,805,580	-		MIT1002_01635	0.53	+0.8
1,805,580	-		MIT1002_01635	0.53	+1.3
1,805,582	-		MIT1002_01635	0.53	-2.1
1,805,606	+		MIT1002_01635	0.56	+0.3
1,805,619	+		MIT1002_01635	0.58	+0.5
1,805,627	-		MIT1002_01635	0.59	+1.0
1,805,628	+		MIT1002_01635	0.59	-1.4
1,805,629	+		MIT1002_01635	0.59	-0.4
1,805,650	+		MIT1002_01635	0.61	-0.2
1,805,653	+		MIT1002_01635	0.62	+0.4
1,805,917	+				+0.2
1,805,941	+				-0.1
1,805,973	+				+0.1