Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01600

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
1,762,108	+		MIT1002_01599	0.33	-1.9
1,762,113	-		MIT1002_01599	0.33	-0.6
1,762,116	-		MIT1002_01599	0.33	+0.3
1,762,116	-		MIT1002_01599	0.33	+1.5
1,762,121	-		MIT1002_01599	0.34	-0.4
1,762,196	+		MIT1002_01599	0.40	-0.4
1,762,267	+		MIT1002_01599	0.45	-0.0
1,762,267	+		MIT1002_01599	0.45	-1.7
1,762,273	-		MIT1002_01599	0.46	-1.0
1,762,433	+		MIT1002_01599	0.59	+0.2
1,762,443	+		MIT1002_01599	0.59	+1.9
1,762,443	+		MIT1002_01599	0.59	+2.4
1,762,443	+		MIT1002_01599	0.59	-1.2
1,762,443	+		MIT1002_01599	0.59	+1.4
1,762,451	-		MIT1002_01599	0.60	-0.1
1,762,465	+		MIT1002_01599	0.61	-2.9
1,762,465	+		MIT1002_01599	0.61	+1.8
1,762,473	-		MIT1002_01599	0.62	-0.6
1,762,473	-		MIT1002_01599	0.62	-0.2
1,762,492	+		MIT1002_01599	0.63	-0.8
1,762,506	+		MIT1002_01599	0.64	-0.4
1,762,521	-		MIT1002_01599	0.66	+0.3
1,762,580	-		MIT1002_01599	0.70	-2.1
1,762,655	+		MIT1002_01599	0.76	+0.0
1,762,746	+		MIT1002_01599	0.83	-0.2
1,762,793	-		MIT1002_01599	0.87	-1.1
1,762,822	+		MIT1002_01599	0.90	-1.0
1,762,830	-				-0.1
1,762,840	-				-0.9
1,762,840	-				-1.4
1,762,893	-				-0.5
1,763,023	+				+0.6
1,763,055	-				+0.7
1,763,055	-				-1.3
1,763,055	-				-1.8
1,763,128	+				-0.2
1,763,184	+				-0.7
1,763,187	+				+0.6
1,763,192	+				-1.8
1,763,216	+				+0.8
1,763,245	+		MIT1002_01600	0.12	-0.2
1,763,260	+		MIT1002_01600	0.13	+0.7
1,763,313	+		MIT1002_01600	0.18	+0.4
1,763,321	-		MIT1002_01600	0.18	+0.1
1,763,390	+		MIT1002_01600	0.24	+1.0
1,763,390	+		MIT1002_01600	0.24	-0.4
1,763,390	+		MIT1002_01600	0.24	-0.8
1,763,398	-		MIT1002_01600	0.25	+0.4
1,763,398	-		MIT1002_01600	0.25	+0.3
1,763,400	+		MIT1002_01600	0.25	-0.5
1,763,460	+		MIT1002_01600	0.30	-0.4
1,763,468	-		MIT1002_01600	0.31	+0.7
1,763,480	-		MIT1002_01600	0.32	+0.3
1,763,529	-		MIT1002_01600	0.36	-1.1
1,763,540	+		MIT1002_01600	0.37	-0.2
1,763,548	-		MIT1002_01600	0.37	+0.2
1,763,548	-		MIT1002_01600	0.37	-0.4
1,763,609	+		MIT1002_01600	0.43	+0.5
1,763,751	+		MIT1002_01600	0.55	-0.1
1,763,773	+		MIT1002_01600	0.56	+0.1
1,763,779	-		MIT1002_01600	0.57	-0.3
1,763,831	-		MIT1002_01600	0.61	+0.4
1,763,843	+		MIT1002_01600	0.62	+0.9
1,763,880	-		MIT1002_01600	0.65	-0.9
1,763,890	+		MIT1002_01600	0.66	+0.1
1,763,977	-		MIT1002_01600	0.74	+0.8
1,763,982	-		MIT1002_01600	0.74	+0.1
1,764,014	+		MIT1002_01600	0.77	-0.7
1,764,014	+		MIT1002_01600	0.77	-0.4
1,764,014	+		MIT1002_01600	0.77	+0.0
1,764,014	+		MIT1002_01600	0.77	+1.3
1,764,022	-		MIT1002_01600	0.77	-2.4
1,764,122	+		MIT1002_01600	0.86	-0.8
1,764,127	+		MIT1002_01600	0.86	+0.6
1,764,169	-				+0.9
1,764,210	+				-0.0
1,764,245	-				-0.8
1,764,350	-				+0.4
1,764,388	+		MIT1002_01601	0.14	-0.1
1,764,492	-		MIT1002_01601	0.28	-2.0
1,764,497	-		MIT1002_01601	0.28	+0.1
1,764,518	+		MIT1002_01601	0.31	+0.2
1,764,586	-		MIT1002_01601	0.40	-0.1
1,764,808	+		MIT1002_01601	0.70	+0.7
1,764,819	-		MIT1002_01601	0.71	-0.3
1,764,845	+		MIT1002_01601	0.75	-0.7
1,764,947	+		MIT1002_01601	0.88	-1.9
1,765,017	-				-1.1
1,765,025	-				+1.2
1,765,107	+				-0.3
1,765,161	-				+0.7
1,765,163	+				+1.7
1,765,198	+				-0.9
1,765,198	+				-0.6
1,765,206	-				+0.8