Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01596

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
1,758,064	+		MIT1002_01595	0.40	-0.9
1,758,069	-		MIT1002_01595	0.41	-0.6
1,758,083	-		MIT1002_01595	0.42	+0.8
1,758,170	-		MIT1002_01595	0.49	-0.7
1,758,179	-		MIT1002_01595	0.50	-0.6
1,758,186	+		MIT1002_01595	0.50	+0.4
1,758,186	+		MIT1002_01595	0.50	+0.1
1,758,194	-		MIT1002_01595	0.51	-1.1
1,758,207	-		MIT1002_01595	0.52	+1.8
1,758,215	+		MIT1002_01595	0.52	+1.8
1,758,274	-		MIT1002_01595	0.57	+1.6
1,758,274	-		MIT1002_01595	0.57	-0.9
1,758,276	-		MIT1002_01595	0.57	-0.2
1,758,276	-		MIT1002_01595	0.57	+0.7
1,758,276	-		MIT1002_01595	0.57	+1.5
1,758,311	+		MIT1002_01595	0.60	-1.5
1,758,311	+		MIT1002_01595	0.60	-1.2
1,758,352	+		MIT1002_01595	0.63	-1.8
1,758,492	-		MIT1002_01595	0.74	+0.4
1,758,639	+		MIT1002_01595	0.86	-1.5
1,758,807	+				+0.2
1,759,088	-		MIT1002_01596	0.15	-1.3
1,759,128	-		MIT1002_01596	0.23	-1.8
1,759,239	-		MIT1002_01596	0.42	+0.2
1,759,255	+		MIT1002_01596	0.45	-0.6
1,759,261	-		MIT1002_01596	0.46	-0.0
1,759,263	-		MIT1002_01596	0.46	-0.9
1,759,283	+		MIT1002_01596	0.50	-0.0
1,759,297	+		MIT1002_01596	0.52	-0.4
1,759,376	+		MIT1002_01596	0.66	-1.8
1,759,392	+		MIT1002_01596	0.69	+0.8
1,759,398	+		MIT1002_01596	0.70	+0.0
1,759,398	+		MIT1002_01596	0.70	-1.3
1,759,406	-		MIT1002_01596	0.72	-0.2
1,759,412	+		MIT1002_01596	0.73	-1.0
1,759,420	-		MIT1002_01596	0.74	-0.9
1,759,476	+		MIT1002_01596	0.84	+0.4
1,759,485	-		MIT1002_01596	0.86	+0.4
1,759,492	-		MIT1002_01596	0.87	+0.6
1,759,492	-		MIT1002_01596	0.87	+0.7
1,759,494	+		MIT1002_01596	0.87	+0.2
1,759,501	+		MIT1002_01596	0.89	-0.1
1,759,502	-		MIT1002_01596	0.89	+0.0
1,759,517	+				-0.4
1,759,525	-				+0.4
1,759,527	+				-0.6
1,759,527	+				-1.1
1,759,577	-				+0.5
1,759,727	+				-1.1
1,759,735	-				+0.2
1,759,750	+				+0.9
1,759,762	+				-0.2
1,759,762	+				-0.5
1,759,762	+				+0.1
1,759,762	+				+0.1
1,759,763	+				+2.4
1,759,770	-				+0.5
1,759,771	-				-0.9
1,759,771	-				+0.5
1,759,771	-				+1.1
1,759,771	-				+0.3
1,759,771	-				-0.6
1,759,771	-				-0.9
1,759,771	-				-0.5
1,759,771	-				-0.5
1,759,771	-				+0.3
1,759,771	-				-0.1
1,759,847	-				+1.4
1,759,864	+		MIT1002_01597	0.12	+2.0
1,759,866	-		MIT1002_01597	0.12	+0.8
1,759,870	-		MIT1002_01597	0.13	+1.3
1,759,888	+		MIT1002_01597	0.15	-1.5
1,759,888	+		MIT1002_01597	0.15	+0.5
1,759,888	-		MIT1002_01597	0.15	+1.4
1,759,896	-		MIT1002_01597	0.16	+2.3
1,759,974	-		MIT1002_01597	0.25	+2.4
1,760,007	+		MIT1002_01597	0.29	-0.4
1,760,007	+		MIT1002_01597	0.29	+1.2
1,760,015	-		MIT1002_01597	0.30	+1.6
1,760,194	-		MIT1002_01597	0.51	+2.1
1,760,210	+		MIT1002_01597	0.53	+0.7
1,760,215	+		MIT1002_01597	0.54	+1.7
1,760,260	-		MIT1002_01597	0.59	+0.4
1,760,300	+		MIT1002_01597	0.64	+1.6
1,760,335	+		MIT1002_01597	0.68	+2.7
1,760,335	-		MIT1002_01597	0.68	+1.1
1,760,343	-		MIT1002_01597	0.69	+1.2
1,760,343	-		MIT1002_01597	0.69	+1.6
1,760,343	-		MIT1002_01597	0.69	+1.5
1,760,343	-		MIT1002_01597	0.69	+0.5
1,760,343	-		MIT1002_01597	0.69	+0.3
1,760,344	+		MIT1002_01597	0.69	+0.1
1,760,397	+		MIT1002_01597	0.76	-1.5
1,760,397	+		MIT1002_01597	0.76	+1.0
1,760,412	+		MIT1002_01597	0.78	+0.9
1,760,428	+		MIT1002_01597	0.79	+0.4
1,760,479	+		MIT1002_01597	0.86	+0.4
1,760,516	+				+2.0
1,760,525	-				-0.7
1,760,545	-				+0.7