Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01475

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
1,632,752	+		MIT1002_01474	0.65	+0.1
1,632,752	+		MIT1002_01474	0.65	+0.4
1,632,752	+		MIT1002_01474	0.65	-0.1
1,632,760	-		MIT1002_01474	0.66	-1.6
1,632,760	-		MIT1002_01474	0.66	+0.3
1,632,770	-		MIT1002_01474	0.66	+1.7
1,632,891	+		MIT1002_01474	0.72	+1.3
1,633,025	+		MIT1002_01474	0.78	-0.3
1,633,028	-		MIT1002_01474	0.78	-0.9
1,633,167	-		MIT1002_01474	0.85	-0.3
1,633,188	+		MIT1002_01474	0.86	-0.2
1,633,196	-		MIT1002_01474	0.86	-1.2
1,633,215	+		MIT1002_01474	0.87	-0.1
1,633,258	+		MIT1002_01474	0.89	+0.7
1,633,270	+		MIT1002_01474	0.90	+0.1
1,633,323	-				-1.1
1,633,323	-				-0.5
1,633,364	+				+0.5
1,633,377	+				-2.6
1,633,377	+				-0.0
1,633,379	-				-0.5
1,633,442	+				-0.5
1,633,453	-				+1.4
1,633,460	-				+1.2
1,633,495	+				-0.6
1,633,495	+				+0.6
1,633,503	-				+0.4
1,633,503	-				+0.7
1,633,512	+				-1.6
1,633,618	-				-0.1
1,633,635	+				-0.8
1,633,635	+				-0.2
1,633,635	+				-0.4
1,633,643	-				-0.1
1,633,643	-				-0.1
1,633,869	+		MIT1002_01475	0.13	-2.8
1,633,895	+		MIT1002_01475	0.15	+0.9
1,633,903	-		MIT1002_01475	0.15	+0.4
1,634,082	+		MIT1002_01475	0.29	+0.7
1,634,117	+		MIT1002_01475	0.32	-0.4
1,634,186	+		MIT1002_01475	0.37	+1.3
1,634,196	+		MIT1002_01475	0.38	+1.4
1,634,255	+		MIT1002_01475	0.42	-2.0
1,634,255	+		MIT1002_01475	0.42	-2.9
1,634,255	-		MIT1002_01475	0.42	+0.6
1,634,308	+		MIT1002_01475	0.46	+2.4
1,634,308	+		MIT1002_01475	0.46	-0.1
1,634,308	+		MIT1002_01475	0.46	-2.0
1,634,313	-		MIT1002_01475	0.47	+1.0
1,634,316	-		MIT1002_01475	0.47	+0.4
1,634,335	+		MIT1002_01475	0.49	-0.6
1,634,375	+		MIT1002_01475	0.52	+1.5
1,634,375	+		MIT1002_01475	0.52	+0.8
1,634,462	-		MIT1002_01475	0.58	-3.0
1,634,507	+		MIT1002_01475	0.62	-0.8
1,634,532	-		MIT1002_01475	0.64	+1.4
1,634,534	+		MIT1002_01475	0.64	-0.3
1,634,542	-		MIT1002_01475	0.65	-2.6
1,634,635	+		MIT1002_01475	0.72	+0.7
1,634,643	-		MIT1002_01475	0.72	-2.2
1,634,663	-		MIT1002_01475	0.74	+0.4
1,634,690	+		MIT1002_01475	0.76	+0.6
1,634,718	+		MIT1002_01475	0.78	-0.1
1,634,726	-		MIT1002_01475	0.79	-0.4
1,634,732	-		MIT1002_01475	0.79	-1.1
1,634,734	-		MIT1002_01475	0.79	-0.4
1,634,741	-		MIT1002_01475	0.80	-0.4
1,634,766	+		MIT1002_01475	0.82	-0.2
1,634,938	-				-1.2
1,635,057	+				-0.9
1,635,065	-				-1.4
1,635,081	-				-0.2
1,635,104	+				+0.4
1,635,104	+				-0.0
1,635,112	-				-0.6
1,635,119	+				-0.8
1,635,392	-		MIT1002_01476	0.18	-0.4
1,635,839	+		MIT1002_01476	0.47	-0.1