Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01251

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
1,376,549	+		MIT1002_01250	0.51	-0.0
1,376,602	-		MIT1002_01250	0.54	+0.4
1,376,610	-		MIT1002_01250	0.55	-1.2
1,376,637	+		MIT1002_01250	0.57	-1.3
1,376,645	-		MIT1002_01250	0.57	-0.4
1,376,719	+		MIT1002_01250	0.63	+0.7
1,376,719	+		MIT1002_01250	0.63	-0.2
1,376,725	+		MIT1002_01250	0.63	+0.0
1,376,865	+		MIT1002_01250	0.73	+0.5
1,376,880	+		MIT1002_01250	0.74	+1.1
1,376,885	+		MIT1002_01250	0.74	+0.2
1,377,044	-		MIT1002_01250	0.85	-1.2
1,377,089	-		MIT1002_01250	0.89	-0.7
1,377,247	+				-1.5
1,377,302	+				+0.1
1,377,310	-				+0.0
1,377,315	-				-0.3
1,377,357	-				+0.2
1,377,635	+		MIT1002_01251	0.26	+0.5
1,377,672	-		MIT1002_01251	0.31	+1.3
1,377,672	-		MIT1002_01251	0.31	+0.4
1,377,750	-		MIT1002_01251	0.42	+0.1
1,377,834	-		MIT1002_01251	0.54	-0.1
1,377,841	+		MIT1002_01251	0.55	+0.0
1,377,873	+		MIT1002_01251	0.59	-0.7
1,377,930	+		MIT1002_01251	0.67	-0.7
1,377,940	+		MIT1002_01251	0.68	+1.3
1,378,003	+		MIT1002_01251	0.77	+0.2
1,378,003	+		MIT1002_01251	0.77	-1.4
1,378,003	+		MIT1002_01251	0.77	+0.1
1,378,003	+		MIT1002_01251	0.77	+0.8
1,378,003	+		MIT1002_01251	0.77	-0.7
1,378,005	+		MIT1002_01251	0.77	-0.2
1,378,011	-		MIT1002_01251	0.78	+1.3
1,378,011	-		MIT1002_01251	0.78	+1.2
1,378,011	-		MIT1002_01251	0.78	+0.4
1,378,011	-		MIT1002_01251	0.78	+1.1
1,378,013	-		MIT1002_01251	0.78	-0.9
1,378,918	-				-0.0
1,378,986	-		MIT1002_01253	0.10	+0.8
1,378,986	-		MIT1002_01253	0.10	-1.0
1,378,986	-		MIT1002_01253	0.10	-1.1
1,378,986	-		MIT1002_01253	0.10	-2.6
1,378,988	-		MIT1002_01253	0.10	-1.6