Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00020

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 4
23,336	+				-2.9
23,336	+				-0.6
23,344	-				+1.4
23,344	-				+1.4
23,344	-				-1.1
23,350	+				+0.2
23,350	+				+0.5
23,358	-				+0.2
24,375	-		MIT1002_00020	0.12	+0.3
24,845	-				+0.5
24,978	-				-1.3
24,980	+				-1.3
25,066	+				-0.5
25,071	+				-0.3
25,108	+				+0.2
25,108	+				+0.7
25,150	-		MIT1002_00021	0.10	+1.2
25,150	-		MIT1002_00021	0.10	-0.8
25,150	-		MIT1002_00021	0.10	-0.7
25,152	-		MIT1002_00021	0.11	+0.6
25,157	+		MIT1002_00021	0.11	-1.1
25,167	-		MIT1002_00021	0.12	+0.3
25,213	+		MIT1002_00021	0.16	+0.2
25,257	-		MIT1002_00021	0.20	+0.3
25,258	+		MIT1002_00021	0.20	-0.6
25,262	-		MIT1002_00021	0.21	+0.1
25,323	-		MIT1002_00021	0.27	+1.6
25,343	+		MIT1002_00021	0.28	-1.8
25,364	-		MIT1002_00021	0.30	-0.6
25,394	+		MIT1002_00021	0.33	-1.9
25,397	-		MIT1002_00021	0.33	+0.8
25,402	+		MIT1002_00021	0.34	-0.8
25,448	+		MIT1002_00021	0.38	-0.2
25,450	+		MIT1002_00021	0.38	-2.5
25,450	+		MIT1002_00021	0.38	-0.5
25,458	-		MIT1002_00021	0.39	+0.9
25,499	+		MIT1002_00021	0.43	+0.6
25,499	+		MIT1002_00021	0.43	-4.2
25,530	+		MIT1002_00021	0.46	+1.8
25,535	+		MIT1002_00021	0.46	-0.7
25,548	+		MIT1002_00021	0.47	-0.8
25,553	+		MIT1002_00021	0.48	+1.6
25,561	-		MIT1002_00021	0.49	+1.1
25,625	+		MIT1002_00021	0.55	-0.3
25,633	-		MIT1002_00021	0.55	-2.3
25,660	-		MIT1002_00021	0.58	+2.1
25,735	+		MIT1002_00021	0.65	-0.3
25,735	+		MIT1002_00021	0.65	-0.1
25,743	-		MIT1002_00021	0.66	+0.7
25,743	-		MIT1002_00021	0.66	+0.5
25,746	+		MIT1002_00021	0.66	-0.2
25,754	-		MIT1002_00021	0.67	+0.7
25,772	-		MIT1002_00021	0.68	-0.4
25,786	+		MIT1002_00021	0.70	+0.2