Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS09430 and QEN71_RS09435 overlap by 4 nucleotides QEN71_RS09435 and QEN71_RS09440 are separated by 14 nucleotides
QEN71_RS09430: QEN71_RS09430 - ABC transporter ATP-binding protein, at 2,108,434 to 2,109,453
_RS09430
QEN71_RS09435: QEN71_RS09435 - dihydroxyacetone kinase subunit DhaL, at 2,109,450 to 2,110,085
_RS09435
QEN71_RS09440: QEN71_RS09440 - dihydroxyacetone kinase subunit DhaK, at 2,110,100 to 2,111,089
_RS09440
Position (kb)
2109
2110
2111 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2108.612 kb on + strand, within QEN71_RS09430 at 2108.612 kb on + strand, within QEN71_RS09430 at 2108.612 kb on + strand, within QEN71_RS09430 at 2108.613 kb on - strand, within QEN71_RS09430 at 2108.613 kb on - strand, within QEN71_RS09430 at 2108.613 kb on - strand, within QEN71_RS09430 at 2108.683 kb on + strand, within QEN71_RS09430 at 2108.683 kb on + strand, within QEN71_RS09430 at 2108.684 kb on - strand, within QEN71_RS09430 at 2108.692 kb on + strand, within QEN71_RS09430 at 2108.692 kb on + strand, within QEN71_RS09430 at 2108.805 kb on + strand, within QEN71_RS09430 at 2108.806 kb on - strand, within QEN71_RS09430 at 2109.004 kb on + strand, within QEN71_RS09430 at 2109.004 kb on + strand, within QEN71_RS09430 at 2109.005 kb on - strand, within QEN71_RS09430 at 2109.005 kb on - strand, within QEN71_RS09430 at 2109.005 kb on - strand, within QEN71_RS09430 at 2109.005 kb on - strand, within QEN71_RS09430 at 2109.005 kb on - strand, within QEN71_RS09430 at 2109.289 kb on + strand, within QEN71_RS09430 at 2109.418 kb on + strand at 2109.418 kb on + strand at 2109.419 kb on - strand at 2109.509 kb on + strand at 2109.510 kb on - strand at 2109.510 kb on - strand at 2109.557 kb on + strand, within QEN71_RS09435 at 2109.557 kb on + strand, within QEN71_RS09435 at 2109.557 kb on + strand, within QEN71_RS09435 at 2109.558 kb on - strand, within QEN71_RS09435 at 2109.558 kb on - strand, within QEN71_RS09435 at 2110.183 kb on - strand at 2110.415 kb on + strand, within QEN71_RS09440 at 2110.415 kb on + strand, within QEN71_RS09440 at 2110.415 kb on + strand, within QEN71_RS09440 at 2110.416 kb on - strand, within QEN71_RS09440 at 2110.416 kb on - strand, within QEN71_RS09440 at 2110.416 kb on - strand, within QEN71_RS09440 at 2110.517 kb on + strand, within QEN71_RS09440 at 2110.517 kb on + strand, within QEN71_RS09440 at 2110.639 kb on + strand, within QEN71_RS09440 at 2110.639 kb on + strand, within QEN71_RS09440 at 2110.639 kb on + strand, within QEN71_RS09440 at 2110.639 kb on + strand, within QEN71_RS09440 at 2110.639 kb on + strand, within QEN71_RS09440 at 2110.639 kb on + strand, within QEN71_RS09440 at 2110.639 kb on + strand, within QEN71_RS09440 at 2110.639 kb on + strand, within QEN71_RS09440 at 2110.639 kb on + strand, within QEN71_RS09440 at 2110.640 kb on - strand, within QEN71_RS09440 at 2110.640 kb on - strand, within QEN71_RS09440 at 2110.640 kb on - strand, within QEN71_RS09440 at 2110.640 kb on - strand, within QEN71_RS09440 at 2110.879 kb on + strand, within QEN71_RS09440 at 2110.879 kb on + strand, within QEN71_RS09440 at 2110.880 kb on - strand, within QEN71_RS09440 at 2110.898 kb on + strand, within QEN71_RS09440 at 2110.898 kb on + strand, within QEN71_RS09440 at 2110.898 kb on + strand, within QEN71_RS09440 at 2110.898 kb on + strand, within QEN71_RS09440 at 2110.899 kb on - strand, within QEN71_RS09440 at 2110.899 kb on - strand, within QEN71_RS09440 at 2110.899 kb on - strand, within QEN71_RS09440 at 2111.062 kb on + strand at 2111.062 kb on + strand at 2111.062 kb on + strand at 2111.062 kb on + strand at 2111.063 kb on - strand at 2111.063 kb on - strand at 2111.063 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 2,108,612 + QEN71_RS09430 0.17 -0.4 2,108,612 + QEN71_RS09430 0.17 +1.4 2,108,612 + QEN71_RS09430 0.17 +0.4 2,108,613 - QEN71_RS09430 0.18 -2.6 2,108,613 - QEN71_RS09430 0.18 -0.2 2,108,613 - QEN71_RS09430 0.18 -1.2 2,108,683 + QEN71_RS09430 0.24 +1.1 2,108,683 + QEN71_RS09430 0.24 -0.4 2,108,684 - QEN71_RS09430 0.25 -0.2 2,108,692 + QEN71_RS09430 0.25 +0.5 2,108,692 + QEN71_RS09430 0.25 -0.5 2,108,805 + QEN71_RS09430 0.36 +1.1 2,108,806 - QEN71_RS09430 0.36 +0.1 2,109,004 + QEN71_RS09430 0.56 -0.2 2,109,004 + QEN71_RS09430 0.56 -0.8 2,109,005 - QEN71_RS09430 0.56 +0.2 2,109,005 - QEN71_RS09430 0.56 +1.0 2,109,005 - QEN71_RS09430 0.56 -0.5 2,109,005 - QEN71_RS09430 0.56 -0.6 2,109,005 - QEN71_RS09430 0.56 +0.2 2,109,289 + QEN71_RS09430 0.84 +0.4 2,109,418 + -0.3 2,109,418 + +0.8 2,109,419 - -2.1 2,109,509 + +2.0 2,109,510 - +0.5 2,109,510 - -0.2 2,109,557 + QEN71_RS09435 0.17 +1.6 2,109,557 + QEN71_RS09435 0.17 -0.3 2,109,557 + QEN71_RS09435 0.17 +0.8 2,109,558 - QEN71_RS09435 0.17 -0.3 2,109,558 - QEN71_RS09435 0.17 +0.9 2,110,183 - +0.3 2,110,415 + QEN71_RS09440 0.32 -0.7 2,110,415 + QEN71_RS09440 0.32 -0.3 2,110,415 + QEN71_RS09440 0.32 +0.2 2,110,416 - QEN71_RS09440 0.32 -0.2 2,110,416 - QEN71_RS09440 0.32 -0.4 2,110,416 - QEN71_RS09440 0.32 -0.3 2,110,517 + QEN71_RS09440 0.42 +0.4 2,110,517 + QEN71_RS09440 0.42 -0.8 2,110,639 + QEN71_RS09440 0.54 -0.8 2,110,639 + QEN71_RS09440 0.54 +0.2 2,110,639 + QEN71_RS09440 0.54 -1.3 2,110,639 + QEN71_RS09440 0.54 -0.7 2,110,639 + QEN71_RS09440 0.54 -1.4 2,110,639 + QEN71_RS09440 0.54 +0.3 2,110,639 + QEN71_RS09440 0.54 -0.3 2,110,639 + QEN71_RS09440 0.54 -1.9 2,110,639 + QEN71_RS09440 0.54 +0.8 2,110,640 - QEN71_RS09440 0.55 -0.8 2,110,640 - QEN71_RS09440 0.55 -0.4 2,110,640 - QEN71_RS09440 0.55 +1.1 2,110,640 - QEN71_RS09440 0.55 -0.9 2,110,879 + QEN71_RS09440 0.79 -0.7 2,110,879 + QEN71_RS09440 0.79 -1.0 2,110,880 - QEN71_RS09440 0.79 +0.8 2,110,898 + QEN71_RS09440 0.81 -1.3 2,110,898 + QEN71_RS09440 0.81 -0.1 2,110,898 + QEN71_RS09440 0.81 +0.8 2,110,898 + QEN71_RS09440 0.81 +0.2 2,110,899 - QEN71_RS09440 0.81 -0.3 2,110,899 - QEN71_RS09440 0.81 -0.2 2,110,899 - QEN71_RS09440 0.81 +1.1 2,111,062 + -1.2 2,111,062 + +0.7 2,111,062 + -1.3 2,111,062 + -0.6 2,111,063 - -0.5 2,111,063 - -0.1 2,111,063 - -1.2
Or see this region's nucleotide sequence