Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS07165 and QEN71_RS07170 are separated by 105 nucleotides QEN71_RS07170 and QEN71_RS07175 are separated by 511 nucleotides
QEN71_RS07165: QEN71_RS07165 - tetratricopeptide repeat protein, at 1,592,783 to 1,594,012
_RS07165
QEN71_RS07170: QEN71_RS07170 - PspA/IM30 family protein, at 1,594,118 to 1,594,798
_RS07170
QEN71_RS07175: QEN71_RS07175 - hypothetical protein, at 1,595,310 to 1,595,966
_RS07175
Position (kb)
1594
1595 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1593.156 kb on + strand, within QEN71_RS07165 at 1593.463 kb on + strand, within QEN71_RS07165 at 1593.611 kb on - strand, within QEN71_RS07165 at 1593.662 kb on - strand, within QEN71_RS07165 at 1593.671 kb on + strand, within QEN71_RS07165 at 1593.819 kb on + strand, within QEN71_RS07165 at 1593.819 kb on + strand, within QEN71_RS07165 at 1593.819 kb on + strand, within QEN71_RS07165 at 1593.820 kb on - strand, within QEN71_RS07165 at 1593.820 kb on - strand, within QEN71_RS07165 at 1593.825 kb on + strand, within QEN71_RS07165 at 1593.825 kb on + strand, within QEN71_RS07165 at 1593.825 kb on + strand, within QEN71_RS07165 at 1593.825 kb on + strand, within QEN71_RS07165 at 1593.825 kb on + strand, within QEN71_RS07165 at 1593.825 kb on + strand, within QEN71_RS07165 at 1593.825 kb on + strand, within QEN71_RS07165 at 1593.826 kb on - strand, within QEN71_RS07165 at 1593.826 kb on - strand, within QEN71_RS07165 at 1593.826 kb on - strand, within QEN71_RS07165 at 1593.826 kb on - strand, within QEN71_RS07165 at 1593.826 kb on - strand, within QEN71_RS07165 at 1594.050 kb on + strand at 1594.058 kb on + strand at 1594.059 kb on - strand at 1594.092 kb on - strand at 1594.092 kb on - strand at 1594.092 kb on - strand at 1594.092 kb on - strand at 1594.120 kb on - strand at 1594.349 kb on - strand, within QEN71_RS07170 at 1594.349 kb on - strand, within QEN71_RS07170 at 1594.587 kb on + strand, within QEN71_RS07170 at 1594.587 kb on + strand, within QEN71_RS07170 at 1594.587 kb on + strand, within QEN71_RS07170 at 1594.587 kb on + strand, within QEN71_RS07170 at 1594.587 kb on + strand, within QEN71_RS07170 at 1594.587 kb on + strand, within QEN71_RS07170 at 1594.587 kb on + strand, within QEN71_RS07170 at 1594.587 kb on + strand, within QEN71_RS07170 at 1594.588 kb on - strand, within QEN71_RS07170 at 1594.588 kb on - strand, within QEN71_RS07170 at 1594.588 kb on - strand, within QEN71_RS07170 at 1594.588 kb on - strand, within QEN71_RS07170 at 1594.588 kb on - strand, within QEN71_RS07170 at 1594.588 kb on - strand, within QEN71_RS07170 at 1594.588 kb on - strand, within QEN71_RS07170 at 1594.588 kb on - strand, within QEN71_RS07170 at 1594.588 kb on - strand, within QEN71_RS07170 at 1594.588 kb on - strand, within QEN71_RS07170 at 1594.852 kb on + strand at 1594.852 kb on + strand at 1594.853 kb on - strand at 1594.853 kb on - strand at 1594.853 kb on - strand at 1594.853 kb on - strand at 1594.869 kb on + strand at 1594.869 kb on + strand at 1594.869 kb on + strand at 1594.870 kb on - strand at 1594.875 kb on + strand at 1594.875 kb on + strand at 1594.875 kb on + strand at 1594.876 kb on - strand at 1594.876 kb on - strand at 1594.876 kb on - strand at 1594.876 kb on - strand at 1594.876 kb on - strand at 1594.881 kb on - strand at 1594.881 kb on - strand at 1595.000 kb on + strand at 1595.007 kb on - strand at 1595.016 kb on + strand at 1595.017 kb on - strand at 1595.017 kb on - strand at 1595.097 kb on - strand at 1595.099 kb on + strand at 1595.099 kb on + strand at 1595.099 kb on + strand at 1595.111 kb on - strand at 1595.111 kb on - strand at 1595.116 kb on + strand at 1595.116 kb on + strand at 1595.117 kb on - strand at 1595.127 kb on + strand at 1595.128 kb on - strand at 1595.128 kb on - strand at 1595.255 kb on + strand at 1595.256 kb on - strand at 1595.256 kb on - strand at 1595.256 kb on - strand at 1595.256 kb on - strand at 1595.263 kb on + strand at 1595.263 kb on + strand at 1595.263 kb on + strand at 1595.263 kb on + strand at 1595.263 kb on + strand at 1595.263 kb on + strand at 1595.263 kb on + strand at 1595.263 kb on + strand at 1595.264 kb on - strand at 1595.264 kb on - strand at 1595.264 kb on - strand at 1595.264 kb on - strand at 1595.264 kb on - strand at 1595.285 kb on + strand at 1595.285 kb on + strand at 1595.564 kb on + strand, within QEN71_RS07175 at 1595.565 kb on - strand, within QEN71_RS07175 at 1595.633 kb on + strand, within QEN71_RS07175 at 1595.633 kb on + strand, within QEN71_RS07175 at 1595.634 kb on - strand, within QEN71_RS07175 at 1595.634 kb on - strand, within QEN71_RS07175 at 1595.635 kb on - strand, within QEN71_RS07175
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 1,593,156 + QEN71_RS07165 0.30 -0.5 1,593,463 + QEN71_RS07165 0.55 +0.7 1,593,611 - QEN71_RS07165 0.67 -0.9 1,593,662 - QEN71_RS07165 0.71 -0.6 1,593,671 + QEN71_RS07165 0.72 -1.9 1,593,819 + QEN71_RS07165 0.84 -0.1 1,593,819 + QEN71_RS07165 0.84 +0.8 1,593,819 + QEN71_RS07165 0.84 +0.3 1,593,820 - QEN71_RS07165 0.84 +0.9 1,593,820 - QEN71_RS07165 0.84 +0.5 1,593,825 + QEN71_RS07165 0.85 -0.8 1,593,825 + QEN71_RS07165 0.85 -2.4 1,593,825 + QEN71_RS07165 0.85 +1.3 1,593,825 + QEN71_RS07165 0.85 -0.7 1,593,825 + QEN71_RS07165 0.85 -0.8 1,593,825 + QEN71_RS07165 0.85 +1.1 1,593,825 + QEN71_RS07165 0.85 -0.8 1,593,826 - QEN71_RS07165 0.85 -0.6 1,593,826 - QEN71_RS07165 0.85 +0.7 1,593,826 - QEN71_RS07165 0.85 +2.2 1,593,826 - QEN71_RS07165 0.85 +0.6 1,593,826 - QEN71_RS07165 0.85 -1.3 1,594,050 + +0.7 1,594,058 + +0.0 1,594,059 - -0.7 1,594,092 - +0.4 1,594,092 - +1.7 1,594,092 - +0.1 1,594,092 - -0.2 1,594,120 - -1.7 1,594,349 - QEN71_RS07170 0.34 -0.9 1,594,349 - QEN71_RS07170 0.34 +0.3 1,594,587 + QEN71_RS07170 0.69 -0.9 1,594,587 + QEN71_RS07170 0.69 +0.4 1,594,587 + QEN71_RS07170 0.69 +0.1 1,594,587 + QEN71_RS07170 0.69 +0.2 1,594,587 + QEN71_RS07170 0.69 -0.7 1,594,587 + QEN71_RS07170 0.69 -0.9 1,594,587 + QEN71_RS07170 0.69 +1.9 1,594,587 + QEN71_RS07170 0.69 +0.0 1,594,588 - QEN71_RS07170 0.69 -1.0 1,594,588 - QEN71_RS07170 0.69 +0.5 1,594,588 - QEN71_RS07170 0.69 -0.8 1,594,588 - QEN71_RS07170 0.69 +1.4 1,594,588 - QEN71_RS07170 0.69 +0.1 1,594,588 - QEN71_RS07170 0.69 +0.5 1,594,588 - QEN71_RS07170 0.69 -1.0 1,594,588 - QEN71_RS07170 0.69 +0.9 1,594,588 - QEN71_RS07170 0.69 +1.5 1,594,588 - QEN71_RS07170 0.69 -0.5 1,594,852 + +1.1 1,594,852 + -0.0 1,594,853 - -0.9 1,594,853 - -0.2 1,594,853 - +0.4 1,594,853 - -0.7 1,594,869 + +0.6 1,594,869 + +1.0 1,594,869 + -0.5 1,594,870 - -0.4 1,594,875 + +0.1 1,594,875 + +0.8 1,594,875 + +0.2 1,594,876 - +0.3 1,594,876 - -0.1 1,594,876 - +0.7 1,594,876 - +0.4 1,594,876 - -0.2 1,594,881 - -0.7 1,594,881 - -0.9 1,595,000 + -1.1 1,595,007 - -1.1 1,595,016 + -0.4 1,595,017 - -0.0 1,595,017 - +2.1 1,595,097 - +0.3 1,595,099 + -2.0 1,595,099 + +0.8 1,595,099 + +0.1 1,595,111 - +0.5 1,595,111 - +0.7 1,595,116 + +0.8 1,595,116 + +0.7 1,595,117 - +0.3 1,595,127 + -1.5 1,595,128 - +1.3 1,595,128 - +1.2 1,595,255 + -0.4 1,595,256 - +0.6 1,595,256 - +0.6 1,595,256 - +0.4 1,595,256 - -0.3 1,595,263 + +0.1 1,595,263 + -0.1 1,595,263 + +0.1 1,595,263 + -0.5 1,595,263 + -0.5 1,595,263 + -0.2 1,595,263 + +0.5 1,595,263 + -0.6 1,595,264 - -1.1 1,595,264 - -0.2 1,595,264 - -1.3 1,595,264 - +0.3 1,595,264 - -0.8 1,595,285 + -0.2 1,595,285 + -0.5 1,595,564 + QEN71_RS07175 0.39 +1.9 1,595,565 - QEN71_RS07175 0.39 +0.6 1,595,633 + QEN71_RS07175 0.49 +1.1 1,595,633 + QEN71_RS07175 0.49 -0.1 1,595,634 - QEN71_RS07175 0.49 -0.4 1,595,634 - QEN71_RS07175 0.49 +0.5 1,595,635 - QEN71_RS07175 0.49 +1.1
Or see this region's nucleotide sequence