Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03568

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
3,993,282	-		MIT1002_03567	0.46	-1.2
3,993,282	-		MIT1002_03567	0.46	-1.7
3,993,338	-		MIT1002_03567	0.49	-2.5
3,993,340	+		MIT1002_03567	0.49	-1.3
3,993,340	+		MIT1002_03567	0.49	-3.2
3,993,428	+		MIT1002_03567	0.54	-1.7
3,993,436	-		MIT1002_03567	0.54	-2.4
3,993,436	-		MIT1002_03567	0.54	-2.3
3,993,436	-		MIT1002_03567	0.54	-2.0
3,993,443	-		MIT1002_03567	0.55	-1.9
3,993,453	+		MIT1002_03567	0.55	-1.6
3,993,453	-		MIT1002_03567	0.55	-0.3
3,993,479	-		MIT1002_03567	0.57	-0.8
3,993,481	+		MIT1002_03567	0.57	-1.7
3,993,775	+		MIT1002_03567	0.73	-1.3
3,993,775	+		MIT1002_03567	0.73	-1.9
3,993,783	-		MIT1002_03567	0.74	-1.7
3,993,843	+		MIT1002_03567	0.77	-1.1
3,993,851	-		MIT1002_03567	0.77	-0.3
3,993,851	-		MIT1002_03567	0.77	+1.7
3,993,851	-		MIT1002_03567	0.77	+0.0
3,994,012	-		MIT1002_03567	0.86	-2.0
3,994,014	-		MIT1002_03567	0.86	-0.3
3,994,027	+		MIT1002_03567	0.87	-0.6
3,994,101	+				-1.1
3,994,138	-				-2.2
3,994,253	+				-0.0
3,994,316	+				-1.7
3,994,346	+				+0.7
3,994,459	-		MIT1002_03568	0.15	-2.6
3,994,641	+		MIT1002_03568	0.29	-0.1
3,994,650	-		MIT1002_03568	0.30	-1.0
3,994,661	+		MIT1002_03568	0.31	-1.6
3,994,667	-		MIT1002_03568	0.31	-0.3
3,994,667	-		MIT1002_03568	0.31	-2.4
3,994,669	-		MIT1002_03568	0.31	-2.7
3,994,718	+		MIT1002_03568	0.35	-2.7
3,994,719	+		MIT1002_03568	0.36	-2.3
3,994,727	-		MIT1002_03568	0.36	-0.3
3,994,737	-		MIT1002_03568	0.37	-2.4
3,994,753	+		MIT1002_03568	0.38	-3.3
3,994,902	+		MIT1002_03568	0.50	-0.3
3,994,943	-		MIT1002_03568	0.53	-2.2
3,994,945	+		MIT1002_03568	0.54	-1.2
3,995,025	-		MIT1002_03568	0.60	-0.8
3,995,047	-		MIT1002_03568	0.62	-1.3
3,995,047	-		MIT1002_03568	0.62	+0.0
3,995,108	+		MIT1002_03568	0.67	-2.4
3,995,181	+		MIT1002_03568	0.73	-2.4
3,995,204	-		MIT1002_03568	0.74	-2.0
3,995,243	-		MIT1002_03568	0.78	-1.0
3,995,243	-		MIT1002_03568	0.78	-2.8
3,995,425	-				-1.6
3,995,433	-				-1.6
3,995,433	-				-2.4