Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03526

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
3,943,643	-				-1.7
3,943,657	+				+0.2
3,943,670	+				-0.3
3,943,691	+				+1.0
3,943,693	-				+0.7
3,943,711	+				+2.1
3,943,714	-				+1.4
3,943,729	+				+1.0
3,943,729	+				-0.1
3,943,737	-				+0.1
3,943,737	-				+1.3
3,943,795	+				+3.0
3,943,889	+				+1.6
3,943,935	+				+0.4
3,943,935	+				+1.0
3,943,957	+				-2.4
3,943,965	-				-1.6
3,944,076	+		MIT1002_03525	0.25	+0.6
3,944,099	-		MIT1002_03525	0.28	-1.1
3,944,140	+		MIT1002_03525	0.34	+0.4
3,944,140	+		MIT1002_03525	0.34	-0.8
3,944,140	+		MIT1002_03525	0.34	+1.6
3,944,216	+		MIT1002_03525	0.45	+1.1
3,944,241	-		MIT1002_03525	0.49	-0.0
3,944,264	+		MIT1002_03525	0.52	-0.1
3,944,278	+		MIT1002_03525	0.54	+0.6
3,944,311	-		MIT1002_03525	0.59	-1.2
3,944,361	+		MIT1002_03525	0.66	+1.7
3,944,379	-		MIT1002_03525	0.69	+1.3
3,944,393	+		MIT1002_03525	0.71	-0.5
3,944,458	+		MIT1002_03525	0.80	+2.0
3,944,460	-		MIT1002_03525	0.80	-1.5
3,944,461	-		MIT1002_03525	0.80	-2.2
3,944,466	-		MIT1002_03525	0.81	+1.2
3,944,473	+		MIT1002_03525	0.82	+0.9
3,944,473	+		MIT1002_03525	0.82	+1.7
3,944,481	-		MIT1002_03525	0.83	-0.3
3,944,481	-		MIT1002_03525	0.83	-0.4
3,944,481	-		MIT1002_03525	0.83	+0.3
3,944,481	-		MIT1002_03525	0.83	-0.4
3,944,513	+		MIT1002_03525	0.88	-0.6
3,944,513	+		MIT1002_03525	0.88	+0.7
3,944,513	+		MIT1002_03525	0.88	+0.2
3,944,521	-		MIT1002_03525	0.89	+0.6
3,944,521	-		MIT1002_03525	0.89	+0.5
3,944,521	-		MIT1002_03525	0.89	-0.1
3,944,610	-				+0.4
3,944,615	-				+0.1
3,944,615	-				+0.5
3,944,621	+				+0.2
3,944,654	+				+0.9
3,944,662	-		MIT1002_03526	0.11	+0.2
3,944,713	+		MIT1002_03526	0.19	+0.2
3,944,721	+		MIT1002_03526	0.20	+0.6
3,944,729	-		MIT1002_03526	0.22	+1.2
3,944,729	-		MIT1002_03526	0.22	+0.4
3,944,853	+		MIT1002_03526	0.41	+0.7
3,944,925	-		MIT1002_03526	0.53	+1.4
3,945,021	+		MIT1002_03526	0.68	-2.4
3,945,035	+		MIT1002_03526	0.70	+0.6
3,945,037	+		MIT1002_03526	0.71	+1.8
3,945,116	+		MIT1002_03526	0.83	+0.8
3,945,155	-		MIT1002_03526	0.89	-0.3
3,945,172	+				+0.5
3,945,386	+				-0.9
3,945,407	+				-1.3
3,945,410	+				-2.1
3,945,449	-				+0.9
3,945,542	+				+1.8
3,945,563	-				+0.1
3,945,612	-				+1.8
3,945,625	-				-0.2
3,945,668	+				+0.4
3,945,709	+				-1.5
3,945,717	-				+0.0
3,945,760	+		MIT1002_03527	0.12	-0.5
3,945,798	-		MIT1002_03527	0.13	-3.5
3,945,855	-		MIT1002_03527	0.15	-0.3
3,945,887	+		MIT1002_03527	0.17	+1.0
3,945,895	-		MIT1002_03527	0.17	+1.6
3,945,925	+		MIT1002_03527	0.18	-2.6
3,945,958	+		MIT1002_03527	0.20	+0.1
3,945,970	+		MIT1002_03527	0.20	-0.6
3,945,998	+		MIT1002_03527	0.21	+0.3
3,945,999	-		MIT1002_03527	0.21	+0.1
3,946,006	-		MIT1002_03527	0.22	-0.6
3,946,022	-		MIT1002_03527	0.22	-0.2
3,946,056	-		MIT1002_03527	0.24	-0.4
3,946,091	-		MIT1002_03527	0.25	+1.6
3,946,122	-		MIT1002_03527	0.26	+0.6
3,946,127	-		MIT1002_03527	0.27	+1.6
3,946,162	+		MIT1002_03527	0.28	+0.7
3,946,174	+		MIT1002_03527	0.29	-0.3