Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03487

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
3,891,937	-		MIT1002_03485	0.86	-1.5
3,891,950	+		MIT1002_03485	0.88	-1.5
3,891,966	-				-1.6
3,892,120	+		MIT1002_03486	0.11	-0.0
3,892,128	-		MIT1002_03486	0.12	-2.1
3,892,128	-		MIT1002_03486	0.12	-1.3
3,892,250	-		MIT1002_03486	0.28	-0.3
3,892,476	+		MIT1002_03486	0.58	-1.2
3,892,476	+		MIT1002_03486	0.58	-1.6
3,892,494	-		MIT1002_03486	0.60	-0.6
3,892,505	+		MIT1002_03486	0.62	-0.6
3,892,610	+		MIT1002_03486	0.75	-1.8
3,892,752	+				-2.4
3,892,752	+				-2.0
3,892,758	+				-1.2
3,892,760	-				-1.6
3,892,838	+				-0.8
3,893,024	+		MIT1002_03487	0.20	-2.3
3,893,108	-		MIT1002_03487	0.27	-0.3
3,893,248	-		MIT1002_03487	0.38	-1.7
3,893,370	+		MIT1002_03487	0.48	-0.8
3,893,380	-		MIT1002_03487	0.49	-0.6
3,893,411	+		MIT1002_03487	0.52	-0.0
3,893,424	-		MIT1002_03487	0.53	-2.1
3,893,503	+		MIT1002_03487	0.60	-1.3
3,893,565	+		MIT1002_03487	0.65	-1.2
3,893,724	-		MIT1002_03487	0.78	-1.6
3,893,766	+		MIT1002_03487	0.81	-0.3
3,893,826	+		MIT1002_03487	0.86	-2.0
3,893,999	-				-3.1
3,894,097	+				-0.8
3,894,189	-		MIT1002_03488	0.14	-2.9
3,894,307	-		MIT1002_03488	0.23	-1.8
3,894,307	-		MIT1002_03488	0.23	-1.2
3,894,359	-		MIT1002_03488	0.27	-2.8
3,894,482	+		MIT1002_03488	0.35	-1.3
3,894,677	-		MIT1002_03488	0.50	-2.1
3,894,770	-		MIT1002_03488	0.56	-1.8
3,894,950	+		MIT1002_03488	0.69	-1.6