Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03447

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
3,853,089	+		MIT1002_03445	0.69	-3.3
3,853,097	-		MIT1002_03445	0.71	-2.4
3,853,132	-		MIT1002_03445	0.81	-0.2
3,853,134	-		MIT1002_03445	0.81	-0.8
3,853,248	+				-2.0
3,853,248	-				-1.6
3,853,250	+				+0.9
3,853,268	+				-1.2
3,853,270	-				+0.1
3,853,276	-				-0.2
3,853,280	+				-1.7
3,853,286	-		MIT1002_03446	0.11	+0.0
3,853,382	+		MIT1002_03446	0.26	+1.1
3,853,409	-		MIT1002_03446	0.30	-1.0
3,853,511	-		MIT1002_03446	0.46	-0.3
3,853,539	-		MIT1002_03446	0.50	-0.3
3,853,566	+		MIT1002_03446	0.54	-0.2
3,853,566	+		MIT1002_03446	0.54	+0.2
3,853,934	-				-0.8
3,853,942	+				+0.1
3,853,944	-				+0.1
3,853,961	-				-0.3
3,853,971	+				+2.2
3,853,971	+				-0.2
3,853,971	+				-1.3
3,853,971	-				+0.5
3,853,979	-				-0.3
3,853,979	-				+0.4
3,853,985	-				-1.5
3,854,016	+				+0.0
3,854,047	+				+1.1
3,854,085	+				-0.8
3,854,093	-				-0.7
3,854,188	+		MIT1002_03447	0.12	-1.3
3,854,189	-		MIT1002_03447	0.12	-0.8
3,854,189	-		MIT1002_03447	0.12	-0.0
3,854,189	-		MIT1002_03447	0.12	+0.2
3,854,204	+		MIT1002_03447	0.14	-0.1
3,854,257	+		MIT1002_03447	0.19	+1.8
3,854,319	+		MIT1002_03447	0.25	+0.3
3,854,321	+		MIT1002_03447	0.25	-0.4
3,854,327	-		MIT1002_03447	0.25	-2.3
3,854,327	-		MIT1002_03447	0.25	+1.1
3,854,329	+		MIT1002_03447	0.26	+0.3
3,854,362	-		MIT1002_03447	0.29	-1.0
3,854,500	-		MIT1002_03447	0.42	+1.4
3,854,527	+		MIT1002_03447	0.44	+0.8
3,854,527	+		MIT1002_03447	0.44	-0.4
3,854,527	+		MIT1002_03447	0.44	-0.5
3,854,535	-		MIT1002_03447	0.45	+0.7
3,854,535	-		MIT1002_03447	0.45	-0.2
3,854,540	-		MIT1002_03447	0.46	-0.3
3,854,543	+		MIT1002_03447	0.46	-0.8
3,854,543	+		MIT1002_03447	0.46	-0.7
3,854,571	+		MIT1002_03447	0.49	+0.4
3,854,600	-		MIT1002_03447	0.51	-2.5
3,854,600	-		MIT1002_03447	0.51	-0.2
3,854,613	-		MIT1002_03447	0.53	-0.3
3,854,613	-		MIT1002_03447	0.53	-1.3
3,854,621	-		MIT1002_03447	0.53	-0.2
3,854,733	-		MIT1002_03447	0.64	-0.6
3,854,733	-		MIT1002_03447	0.64	-2.0
3,854,733	-		MIT1002_03447	0.64	+0.3
3,854,733	-		MIT1002_03447	0.64	-1.3
3,854,748	-		MIT1002_03447	0.65	-1.3
3,854,755	-		MIT1002_03447	0.66	-0.8
3,854,787	+		MIT1002_03447	0.69	+0.6
3,854,915	-		MIT1002_03447	0.81	+0.7
3,854,940	+		MIT1002_03447	0.84	-1.8
3,854,948	-		MIT1002_03447	0.84	+0.4
3,854,948	-		MIT1002_03447	0.84	-0.3
3,854,992	-		MIT1002_03447	0.89	+0.8
3,855,002	-		MIT1002_03447	0.90	-2.3
3,855,052	-				-0.4
3,855,105	+				-0.2
3,855,281	-				-2.1
3,855,311	+				+0.2
3,855,340	-				-0.8
3,855,352	-				-0.7
3,855,359	-				+1.0
3,855,360	-				-0.4
3,855,367	-				+2.9
3,855,404	-		MIT1002_03448	0.12	+0.0
3,855,451	-		MIT1002_03448	0.14	+0.1
3,855,459	-		MIT1002_03448	0.15	-0.4
3,855,490	-		MIT1002_03448	0.17	-0.2
3,855,585	+		MIT1002_03448	0.22	-0.7
3,855,585	+		MIT1002_03448	0.22	-0.2
3,855,593	-		MIT1002_03448	0.23	+0.3
3,855,640	-		MIT1002_03448	0.25	+0.1
3,855,773	-		MIT1002_03448	0.33	-0.0
3,855,843	+		MIT1002_03448	0.37	-0.3
3,855,843	+		MIT1002_03448	0.37	+0.4
3,855,927	-		MIT1002_03448	0.42	+0.1
3,855,946	+		MIT1002_03448	0.43	+1.0
3,855,986	+		MIT1002_03448	0.46	-0.0
3,855,994	-		MIT1002_03448	0.46	+1.0
3,856,081	-		MIT1002_03448	0.51	+0.3
3,856,090	-		MIT1002_03448	0.52	-0.4