Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03353

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
3,750,064	+				-0.2
3,750,064	+				+0.6
3,750,191	-				-1.1
3,750,198	+				-1.3
3,750,243	-				+0.3
3,750,316	-		MIT1002_03352	0.12	+3.4
3,750,451	-		MIT1002_03352	0.29	-0.5
3,750,513	+		MIT1002_03352	0.36	+0.6
3,750,627	-		MIT1002_03352	0.50	-0.2
3,750,641	+		MIT1002_03352	0.52	+1.7
3,750,698	+		MIT1002_03352	0.59	-0.2
3,750,706	-		MIT1002_03352	0.60	+0.5
3,750,706	-		MIT1002_03352	0.60	-0.5
3,750,706	-		MIT1002_03352	0.60	+0.2
3,750,754	+		MIT1002_03352	0.65	+1.3
3,750,754	+		MIT1002_03352	0.65	+0.7
3,750,754	+		MIT1002_03352	0.65	-0.9
3,750,815	-		MIT1002_03352	0.73	-0.8
3,750,886	-		MIT1002_03352	0.82	-1.3
3,750,889	-		MIT1002_03352	0.82	+0.2
3,751,022	+				+0.4
3,751,047	-				-0.4
3,751,060	+				-1.0
3,751,083	+				+0.2
3,751,112	+				+0.1
3,751,127	+				-1.5
3,751,188	+		MIT1002_03353	0.11	-0.6
3,751,188	+		MIT1002_03353	0.11	+0.5
3,751,193	+		MIT1002_03353	0.12	+0.9
3,751,215	+		MIT1002_03353	0.13	+0.6
3,751,223	-		MIT1002_03353	0.14	-0.7
3,751,296	+		MIT1002_03353	0.20	-0.9
3,751,301	+		MIT1002_03353	0.21	-1.4
3,751,391	+		MIT1002_03353	0.28	-1.2
3,751,393	-		MIT1002_03353	0.29	+0.4
3,751,396	+		MIT1002_03353	0.29	-0.1
3,751,404	-		MIT1002_03353	0.30	-0.4
3,751,469	+		MIT1002_03353	0.35	+0.6
3,751,528	+		MIT1002_03353	0.40	+0.9
3,751,538	-		MIT1002_03353	0.41	+0.2
3,751,600	-		MIT1002_03353	0.46	-0.6
3,751,688	+		MIT1002_03353	0.54	-1.2
3,751,743	+		MIT1002_03353	0.58	-0.6
3,751,743	+		MIT1002_03353	0.58	-1.5
3,751,751	-		MIT1002_03353	0.59	-1.7
3,751,751	-		MIT1002_03353	0.59	-0.9
3,751,751	-		MIT1002_03353	0.59	+0.7
3,751,762	-		MIT1002_03353	0.60	+0.1
3,751,762	-		MIT1002_03353	0.60	+0.3
3,751,771	+		MIT1002_03353	0.61	-0.0
3,751,797	-		MIT1002_03353	0.63	+0.1
3,751,804	+		MIT1002_03353	0.64	-0.0
3,751,818	+		MIT1002_03353	0.65	-0.6
3,751,882	-		MIT1002_03353	0.70	-1.7
3,751,902	-		MIT1002_03353	0.72	-0.4
3,751,978	+		MIT1002_03353	0.78	+1.4
3,751,986	-		MIT1002_03353	0.79	+0.2
3,752,055	+		MIT1002_03353	0.85	-2.1
3,752,098	+		MIT1002_03353	0.89	-1.4
3,752,187	-				-1.7
3,752,218	+				+0.6
3,752,238	+				-1.2
3,752,238	+				-0.4
3,752,246	-				-0.0
3,752,255	+				-3.1
3,752,263	+				-0.2
3,752,263	+				+1.8
3,752,270	+				+1.1
3,752,270	+				-0.4
3,752,270	+				-0.5
3,752,271	-				-0.6
3,752,278	-				+0.2
3,752,278	-				+0.5
3,752,315	-				+2.4
3,752,442	+				+0.2
3,752,442	+				-0.1
3,752,450	-				-3.5
3,752,450	-				-0.8
3,752,533	+				+0.4
3,752,620	+		MIT1002_03354	0.31	+0.7
3,752,698	-		MIT1002_03354	0.52	-0.9
3,752,698	-		MIT1002_03354	0.52	+1.7
3,752,753	-		MIT1002_03354	0.67	-0.8
3,752,765	-		MIT1002_03354	0.71	-0.5
3,752,873	-				+1.1
3,752,877	+				+2.0
3,752,887	-				+2.3
3,753,106	-		MIT1002_03355	0.41	-1.6
3,753,170	-		MIT1002_03355	0.52	+0.0
3,753,224	+		MIT1002_03355	0.61	-0.4