Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03317

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
3,700,910	+		MIT1002_03316	0.21	-3.1
3,700,918	-		MIT1002_03316	0.22	-0.3
3,700,944	+		MIT1002_03316	0.25	-1.8
3,700,944	+		MIT1002_03316	0.25	-1.4
3,700,952	-		MIT1002_03316	0.26	-0.6
3,700,954	+		MIT1002_03316	0.26	-0.4
3,700,962	-		MIT1002_03316	0.27	+0.6
3,701,064	-		MIT1002_03316	0.39	+0.6
3,701,141	+		MIT1002_03316	0.48	+0.6
3,701,241	-		MIT1002_03316	0.59	-1.6
3,701,252	-		MIT1002_03316	0.61	-0.6
3,701,305	-		MIT1002_03316	0.67	+0.5
3,701,324	+		MIT1002_03316	0.69	-1.8
3,701,324	+		MIT1002_03316	0.69	+1.1
3,701,332	-		MIT1002_03316	0.70	+1.3
3,701,520	+				+1.9
3,701,609	-				-0.9
3,701,614	-				-2.3
3,701,614	-				-0.5
3,701,657	+				+0.4
3,701,690	+				-5.2
3,701,690	+				-2.7
3,701,702	+				+0.4
3,701,710	-				-2.1
3,701,710	-				-2.4
3,701,781	+				-2.7
3,701,789	-				-3.1
3,701,822	-				-1.8
3,701,852	+				-1.6
3,701,852	+				-0.1
3,701,860	-				-4.4
3,701,860	-				-0.6
3,701,860	-				-5.0
3,701,976	+		MIT1002_03317	0.17	-2.3
3,702,090	-		MIT1002_03317	0.35	-4.8
3,702,091	-		MIT1002_03317	0.35	-0.9
3,702,125	+		MIT1002_03317	0.40	-2.6
3,702,130	+		MIT1002_03317	0.41	-4.2
3,702,276	+		MIT1002_03317	0.63	-1.2
3,702,333	+		MIT1002_03317	0.71	-3.5
3,702,425	+		MIT1002_03317	0.85	-0.4
3,702,463	+				-3.9
3,702,471	+				+0.5
3,702,479	-				-1.0
3,702,479	-				-2.8
3,702,479	-				-2.3
3,702,504	-				-3.3
3,702,525	-				-0.8
3,702,558	+				+1.0
3,702,558	+				-0.1
3,702,596	+				-0.6
3,702,606	+				-1.2
3,702,614	-				-1.3
3,702,631	-				-0.7
3,702,631	-				-1.5
3,702,651	-				+1.1
3,702,813	-				-1.5
3,702,828	+				-2.1
3,702,828	+				-0.9
3,702,828	+				+0.4
3,702,838	+		MIT1002_03318	0.10	+2.2
3,702,846	-		MIT1002_03318	0.11	-1.5
3,702,846	-		MIT1002_03318	0.11	-3.2
3,702,861	+		MIT1002_03318	0.11	-1.3
3,702,892	-		MIT1002_03318	0.12	-2.2
3,702,938	-		MIT1002_03318	0.14	-0.9
3,703,002	+		MIT1002_03318	0.17	-2.2
3,703,057	+		MIT1002_03318	0.19	-3.5
3,703,065	-		MIT1002_03318	0.19	-3.6
3,703,069	+		MIT1002_03318	0.20	-0.1
3,703,112	+		MIT1002_03318	0.21	-3.6
3,703,123	+		MIT1002_03318	0.22	-1.1
3,703,131	-		MIT1002_03318	0.22	-0.1
3,703,161	+		MIT1002_03318	0.23	-0.9
3,703,262	+		MIT1002_03318	0.27	-0.4
3,703,262	+		MIT1002_03318	0.27	-3.9
3,703,262	+		MIT1002_03318	0.27	-3.3
3,703,270	-		MIT1002_03318	0.28	-1.1
3,703,275	-		MIT1002_03318	0.28	-3.0
3,703,386	-		MIT1002_03318	0.32	-0.6
3,703,420	-		MIT1002_03318	0.33	-2.7
3,703,431	+		MIT1002_03318	0.34	+0.2
3,703,432	-		MIT1002_03318	0.34	-1.6
3,703,474	+		MIT1002_03318	0.36	-0.9
3,703,479	-		MIT1002_03318	0.36	-0.1
3,703,494	-		MIT1002_03318	0.36	-2.0