Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03295

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
3,675,211	+		MIT1002_03294	0.76	-0.6
3,675,229	-		MIT1002_03294	0.85	+0.7
3,675,229	-		MIT1002_03294	0.85	-0.9
3,675,229	-		MIT1002_03294	0.85	+0.3
3,675,229	-		MIT1002_03294	0.85	-0.5
3,675,248	-				+0.3
3,675,250	+				-0.2
3,675,327	+				-1.0
3,675,375	+				-1.5
3,675,505	-				+1.1
3,675,505	-				+1.2
3,675,572	+				+0.6
3,675,611	-				+2.2
3,675,778	+		MIT1002_03295	0.37	+1.2
3,675,788	+		MIT1002_03295	0.39	-1.4
3,675,790	+		MIT1002_03295	0.40	+0.8
3,675,858	-		MIT1002_03295	0.60	+0.2
3,675,858	-		MIT1002_03295	0.60	+0.8
3,675,858	-		MIT1002_03295	0.60	-0.0
3,675,885	-		MIT1002_03295	0.68	-0.6
3,675,895	+		MIT1002_03295	0.70	-0.5
3,675,937	+		MIT1002_03295	0.83	-0.0
3,675,965	+				-1.5
3,676,005	-				+0.4
3,676,005	-				+1.6
3,676,201	-		MIT1002_03296	0.15	-0.6
3,676,201	-		MIT1002_03296	0.15	+0.6
3,676,201	-		MIT1002_03296	0.15	+0.7
3,676,201	-		MIT1002_03296	0.15	-0.6
3,676,201	-		MIT1002_03296	0.15	+0.8
3,676,240	-		MIT1002_03296	0.22	-0.4
3,676,308	+		MIT1002_03296	0.32	-0.0
3,676,313	+		MIT1002_03296	0.33	+0.5
3,676,316	-		MIT1002_03296	0.33	+2.0
3,676,317	+		MIT1002_03296	0.34	+2.2
3,676,335	-		MIT1002_03296	0.36	+0.5
3,676,354	+		MIT1002_03296	0.39	-0.2
3,676,354	+		MIT1002_03296	0.39	-0.2
3,676,371	+		MIT1002_03296	0.42	+1.0
3,676,383	+		MIT1002_03296	0.44	-3.3
3,676,477	+		MIT1002_03296	0.59	-0.5
3,676,506	+		MIT1002_03296	0.63	-1.7
3,676,514	-		MIT1002_03296	0.64	+1.6
3,676,521	-		MIT1002_03296	0.66	+1.3
3,676,562	-		MIT1002_03296	0.72	+0.1
3,676,564	+		MIT1002_03296	0.72	-0.4
3,676,644	-		MIT1002_03296	0.85	+1.0
3,676,644	-		MIT1002_03296	0.85	-0.1
3,676,688	-				-0.7
3,676,763	-				+0.2
3,676,791	-				-0.1
3,676,805	+				-1.5
3,676,807	-				-1.0
3,676,807	-				-1.2
3,676,808	+				+0.5
3,676,828	-				+0.9
3,676,915	+				+0.6
3,676,949	+				+1.5
3,676,959	+				-0.4
3,676,965	-				+0.1
3,676,967	-				-1.1