Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02807

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
3,110,784	-				+0.1
3,110,798	-				+0.1
3,110,824	+		MIT1002_02806	0.10	+1.0
3,110,824	+		MIT1002_02806	0.10	+0.4
3,110,830	-		MIT1002_02806	0.11	+0.7
3,110,841	+		MIT1002_02806	0.12	+0.4
3,110,849	-		MIT1002_02806	0.13	-1.0
3,110,849	-		MIT1002_02806	0.13	-0.6
3,110,856	+		MIT1002_02806	0.14	-1.8
3,110,873	+		MIT1002_02806	0.16	+1.1
3,110,902	-		MIT1002_02806	0.20	-0.3
3,110,942	-		MIT1002_02806	0.25	+0.0
3,111,030	+		MIT1002_02806	0.37	+0.9
3,111,059	+		MIT1002_02806	0.41	-0.1
3,111,059	+		MIT1002_02806	0.41	+1.0
3,111,108	+		MIT1002_02806	0.47	-0.4
3,111,126	+		MIT1002_02806	0.50	+1.4
3,111,134	-		MIT1002_02806	0.51	+1.0
3,111,176	-		MIT1002_02806	0.56	-0.9
3,111,248	-		MIT1002_02806	0.65	+0.7
3,111,304	-		MIT1002_02806	0.73	-2.1
3,111,338	+		MIT1002_02806	0.77	-0.5
3,111,369	+		MIT1002_02806	0.81	-0.4
3,111,417	-		MIT1002_02806	0.88	+1.1
3,111,417	-		MIT1002_02806	0.88	+0.1
3,111,424	+		MIT1002_02806	0.88	-1.7
3,111,424	+		MIT1002_02806	0.88	-0.3
3,111,424	+		MIT1002_02806	0.88	-0.4
3,111,432	-		MIT1002_02806	0.90	+0.5
3,111,514	+				+1.3
3,111,522	-				-1.3
3,111,579	+				-1.3
3,111,579	+				-0.5
3,111,587	+				-1.0
3,111,587	-				+0.1
3,111,595	-				+1.7
3,111,604	+				-0.1
3,111,604	+				-1.9
3,111,604	+				+1.0
3,111,612	-				-1.1
3,111,612	-				-2.3
3,111,623	-				+0.4
3,112,043	+		MIT1002_02807	0.36	-2.8
3,112,091	+		MIT1002_02807	0.42	-1.6
3,112,100	+		MIT1002_02807	0.43	-1.7
3,112,153	+		MIT1002_02807	0.50	-2.4
3,112,168	+		MIT1002_02807	0.52	-1.8
3,112,176	-		MIT1002_02807	0.53	-0.4
3,112,199	-		MIT1002_02807	0.56	-1.6
3,112,272	+		MIT1002_02807	0.65	-0.6
3,112,339	-		MIT1002_02807	0.74	-1.3
3,112,339	-		MIT1002_02807	0.74	-2.1
3,112,514	+				-0.9
3,112,540	+				+0.2
3,112,615	+				-0.3
3,112,615	+				-0.1
3,112,623	+				-0.5
3,112,623	+				+0.4
3,112,623	-				-0.2
3,112,623	-				-1.1
3,112,623	-				+0.1
3,112,704	-				-0.1
3,112,767	-				-0.0
3,112,860	+		MIT1002_02808	0.14	-0.3
3,112,860	+		MIT1002_02808	0.14	-0.3
3,112,865	-		MIT1002_02808	0.15	-0.2
3,112,875	+		MIT1002_02808	0.16	-1.0
3,113,004	+		MIT1002_02808	0.26	+1.2
3,113,025	+		MIT1002_02808	0.27	-0.2
3,113,025	+		MIT1002_02808	0.27	-0.1
3,113,028	+		MIT1002_02808	0.28	+0.1
3,113,033	-		MIT1002_02808	0.28	-0.5
3,113,089	+		MIT1002_02808	0.32	+0.4
3,113,097	-		MIT1002_02808	0.33	+1.5
3,113,135	+		MIT1002_02808	0.36	+2.2
3,113,209	+		MIT1002_02808	0.42	-0.1
3,113,284	-		MIT1002_02808	0.48	+1.3
3,113,458	+		MIT1002_02808	0.61	+0.4
3,113,491	+		MIT1002_02808	0.64	-1.3
3,113,491	+		MIT1002_02808	0.64	+0.6
3,113,524	+		MIT1002_02808	0.66	+0.3
3,113,527	-		MIT1002_02808	0.67	-0.2
3,113,527	-		MIT1002_02808	0.67	-0.5
3,113,527	-		MIT1002_02808	0.67	+1.2