Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02702

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
3,001,390	-				+0.5
3,001,454	-		MIT1002_02701	0.12	+1.4
3,001,577	-		MIT1002_02701	0.39	+1.1
3,001,647	-		MIT1002_02701	0.54	+0.9
3,001,664	-		MIT1002_02701	0.58	-2.7
3,001,686	-		MIT1002_02701	0.63	+0.3
3,001,741	-		MIT1002_02701	0.75	+1.5
3,001,751	-		MIT1002_02701	0.78	-0.3
3,001,780	-		MIT1002_02701	0.84	+0.2
3,001,926	-				-0.9
3,001,992	+				-2.5
3,002,024	-				-0.9
3,002,169	-		MIT1002_02702	0.17	-2.9
3,002,198	-		MIT1002_02702	0.20	-6.1
3,002,307	+		MIT1002_02702	0.28	-1.1
3,002,379	-		MIT1002_02702	0.34	-4.2
3,002,409	+		MIT1002_02702	0.37	-3.8
3,002,541	-		MIT1002_02702	0.47	-0.9
3,002,610	+		MIT1002_02702	0.53	-6.1
3,002,733	-		MIT1002_02702	0.62	-3.7
3,002,733	-		MIT1002_02702	0.62	-4.0
3,002,733	-		MIT1002_02702	0.62	-1.9
3,002,733	-		MIT1002_02702	0.62	-3.0
3,002,880	-		MIT1002_02702	0.74	-3.2
3,002,885	-		MIT1002_02702	0.74	-3.1
3,002,907	-		MIT1002_02702	0.76	-0.1
3,002,907	-		MIT1002_02702	0.76	-5.7
3,002,939	+		MIT1002_02702	0.79	-0.7
3,002,944	+		MIT1002_02702	0.79	-4.9
3,002,990	+		MIT1002_02702	0.83	-2.6
3,002,997	-		MIT1002_02702	0.83	-2.0
3,002,998	-		MIT1002_02702	0.83	-3.7
3,003,034	+		MIT1002_02702	0.86	-6.7
3,003,056	+		MIT1002_02702	0.88	-0.5
3,003,059	+		MIT1002_02702	0.88	-2.8
3,003,075	+		MIT1002_02702	0.89	-4.5
3,003,094	-				-3.0
3,003,212	-				-3.9
3,003,220	-				-2.7
3,003,287	+				-4.5
3,003,292	+				-1.6
3,003,295	-				-2.1
3,003,297	-				-2.0
3,003,300	-				-2.2
3,003,351	-				+1.3
3,003,367	-				+1.0