Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02680

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
2,981,761	-		MIT1002_02679	0.25	-2.3
2,981,786	-		MIT1002_02679	0.28	-0.8
2,981,866	+		MIT1002_02679	0.36	+2.2
2,981,866	+		MIT1002_02679	0.36	-1.7
2,981,875	+		MIT1002_02679	0.37	-1.1
2,982,046	+		MIT1002_02679	0.54	-2.6
2,982,048	+		MIT1002_02679	0.55	-2.7
2,982,148	-		MIT1002_02679	0.65	-2.6
2,982,218	-		MIT1002_02679	0.72	-1.6
2,982,350	-		MIT1002_02679	0.85	-0.4
2,982,545	+				-0.2
2,982,545	+				-1.1
2,982,631	+				-0.2
2,982,631	+				-0.5
2,982,631	+				+0.7
2,982,646	+				+0.2
2,982,646	+				-0.4
2,983,405	+				-2.2
2,983,411	+				+0.2
2,983,413	-				+1.6
2,983,413	-				-0.0
2,983,478	-				+1.4
2,983,582	+				+0.2
2,983,606	+				+0.3
2,983,640	+		MIT1002_02681	0.11	-1.4
2,983,730	+		MIT1002_02681	0.23	-1.7
2,983,743	-		MIT1002_02681	0.25	-1.6
2,983,805	-		MIT1002_02681	0.33	+0.7
2,983,856	-		MIT1002_02681	0.40	+0.1
2,983,861	+		MIT1002_02681	0.41	+0.6
2,983,861	+		MIT1002_02681	0.41	-0.6
2,983,880	+		MIT1002_02681	0.43	-1.5
2,983,880	+		MIT1002_02681	0.43	-1.1
2,983,914	-		MIT1002_02681	0.48	+0.5
2,983,929	-		MIT1002_02681	0.50	+0.7
2,983,945	-		MIT1002_02681	0.52	-0.7
2,984,003	-		MIT1002_02681	0.60	-0.5
2,984,017	+		MIT1002_02681	0.62	-0.0
2,984,017	+		MIT1002_02681	0.62	+1.5
2,984,025	-		MIT1002_02681	0.63	+0.4
2,984,025	-		MIT1002_02681	0.63	-3.3
2,984,064	-		MIT1002_02681	0.68	+0.5
2,984,204	+		MIT1002_02681	0.87	+1.9
2,984,226	-				+1.2
2,984,239	+				-2.3
2,984,262	+				-0.9
2,984,316	+				-3.3
2,984,323	+				-2.5
2,984,369	+		MIT1002_02682	0.12	+1.2
2,984,369	+		MIT1002_02682	0.12	+1.2
2,984,428	-		MIT1002_02682	0.22	-5.0