Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02576

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
2,875,914	+		MIT1002_02575	0.53	+1.2
2,875,915	+		MIT1002_02575	0.53	+1.0
2,875,923	-		MIT1002_02575	0.54	-4.0
2,876,057	-		MIT1002_02575	0.63	-1.0
2,876,103	-		MIT1002_02575	0.66	-3.0
2,876,109	+		MIT1002_02575	0.67	-1.4
2,876,117	-		MIT1002_02575	0.67	+0.3
2,876,117	-		MIT1002_02575	0.67	+0.1
2,876,121	+		MIT1002_02575	0.68	-1.4
2,876,199	-		MIT1002_02575	0.73	-0.6
2,876,228	-		MIT1002_02575	0.75	+2.1
2,876,289	-		MIT1002_02575	0.79	+1.4
2,876,321	+		MIT1002_02575	0.82	+1.6
2,876,363	-		MIT1002_02575	0.84	+0.2
2,876,537	+				+0.2
2,876,693	-				-0.0
2,876,765	-				-1.0
2,876,776	-				+0.8
2,876,893	+		MIT1002_02576	0.11	-1.2
2,876,895	-		MIT1002_02576	0.11	-0.9
2,876,922	+		MIT1002_02576	0.14	-2.5
2,877,046	+		MIT1002_02576	0.31	-1.4
2,877,089	+		MIT1002_02576	0.37	-1.5
2,877,099	+		MIT1002_02576	0.38	-2.4
2,877,112	+		MIT1002_02576	0.40	-0.7
2,877,112	+		MIT1002_02576	0.40	-1.1
2,877,148	+		MIT1002_02576	0.45	-1.9
2,877,167	-		MIT1002_02576	0.47	-3.0
2,877,348	-		MIT1002_02576	0.71	-2.4
2,877,401	-		MIT1002_02576	0.78	-1.5
2,877,406	-		MIT1002_02576	0.79	-0.8
2,877,442	+		MIT1002_02576	0.84	-4.3
2,877,500	+				-3.1
2,877,716	+				-4.0
2,877,718	+				-0.9
2,878,001	-		MIT1002_02577	0.71	-0.3
2,878,001	-		MIT1002_02577	0.71	-2.0
2,878,110	-				-0.5
2,878,131	-				+1.5
2,878,221	+				-0.5
2,878,272	+				+1.8
2,878,284	+				-1.2
2,878,328	+				+0.3
2,878,336	-				+0.0
2,878,351	-				-0.6
2,878,365	+				+0.5
2,878,368	-				-0.5
2,878,368	-				-0.8
2,878,375	+				+0.3
2,878,387	+				-0.6
2,878,458	+				+0.4
2,878,466	+				-0.2
2,878,481	+				+1.5
2,878,505	-		MIT1002_02578	0.10	-0.1