Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02572

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
2,870,399	-		MIT1002_02571	0.40	-5.9
2,870,448	+		MIT1002_02571	0.44	-1.0
2,870,454	+		MIT1002_02571	0.44	-2.9
2,870,456	-		MIT1002_02571	0.44	-3.5
2,870,460	+		MIT1002_02571	0.45	-3.5
2,870,476	+		MIT1002_02571	0.46	-2.3
2,870,537	+		MIT1002_02571	0.50	-2.9
2,870,609	-		MIT1002_02571	0.55	-1.6
2,870,678	-		MIT1002_02571	0.60	-2.1
2,870,686	-		MIT1002_02571	0.60	-3.7
2,870,688	-		MIT1002_02571	0.60	-1.8
2,870,760	-		MIT1002_02571	0.65	-2.8
2,870,760	-		MIT1002_02571	0.65	-2.9
2,870,764	-		MIT1002_02571	0.66	-2.2
2,870,769	-		MIT1002_02571	0.66	-0.2
2,870,769	-		MIT1002_02571	0.66	-2.0
2,870,935	+		MIT1002_02571	0.78	-0.4
2,871,062	-		MIT1002_02571	0.86	-2.2
2,871,076	+		MIT1002_02571	0.87	-1.0
2,871,078	+		MIT1002_02571	0.88	-1.1
2,871,084	-		MIT1002_02571	0.88	-3.0
2,871,086	-		MIT1002_02571	0.88	-1.1
2,871,086	-		MIT1002_02571	0.88	-1.7
2,871,086	-		MIT1002_02571	0.88	-4.1
2,871,137	+				-4.5
2,871,154	+				-3.5
2,871,154	-				-1.0
2,871,258	+				-1.2
2,871,265	-				-0.0
2,871,277	+				-1.3
2,871,277	+				-2.6
2,871,277	+				-0.8
2,871,291	+				-2.2
2,871,299	-				+0.7
2,871,301	-				+0.9
2,871,363	+		MIT1002_02572	0.14	-4.4
2,871,363	+		MIT1002_02572	0.14	-2.8
2,871,366	-		MIT1002_02572	0.15	-3.9
2,871,371	-		MIT1002_02572	0.15	-0.5
2,871,371	-		MIT1002_02572	0.15	-0.5
2,871,371	-		MIT1002_02572	0.15	+0.4
2,871,371	-		MIT1002_02572	0.15	-2.6
2,871,375	+		MIT1002_02572	0.16	-1.4
2,871,417	+		MIT1002_02572	0.22	-0.2
2,871,425	-		MIT1002_02572	0.24	-2.8
2,871,602	-		MIT1002_02572	0.50	-3.8
2,871,671	-		MIT1002_02572	0.61	-2.7
2,871,729	+		MIT1002_02572	0.69	-3.9
2,871,793	+		MIT1002_02572	0.79	-2.8
2,871,801	-		MIT1002_02572	0.80	-2.3
2,871,801	-		MIT1002_02572	0.80	-0.9
2,871,830	+		MIT1002_02572	0.84	-5.0
2,871,830	+		MIT1002_02572	0.84	-2.4
2,871,890	+				-1.9
2,871,903	-				-3.5
2,872,037	+				-0.8
2,872,058	+				-3.7
2,872,089	-				-0.5
2,872,112	+		MIT1002_02573	0.10	-1.0
2,872,114	+		MIT1002_02573	0.10	-3.5
2,872,133	+		MIT1002_02573	0.12	-4.7
2,872,180	+		MIT1002_02573	0.16	-2.9
2,872,265	-		MIT1002_02573	0.23	-1.2
2,872,291	+		MIT1002_02573	0.25	-1.2
2,872,309	-		MIT1002_02573	0.26	-1.6
2,872,309	-		MIT1002_02573	0.26	-0.2
2,872,543	+		MIT1002_02573	0.46	-4.2
2,872,580	-		MIT1002_02573	0.49	-0.2
2,872,598	+		MIT1002_02573	0.50	-2.5
2,872,608	+		MIT1002_02573	0.51	-3.0
2,872,759	+		MIT1002_02573	0.64	-1.6
2,872,844	+		MIT1002_02573	0.71	-4.0
2,872,866	-		MIT1002_02573	0.72	-3.7
2,872,866	-		MIT1002_02573	0.72	-2.4
2,872,876	+		MIT1002_02573	0.73	-5.2