Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02490

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
2,775,877	+				-1.6
2,775,967	+				-0.5
2,775,975	-				-1.6
2,776,032	+		MIT1002_02489	0.19	-1.5
2,776,083	+		MIT1002_02489	0.27	+0.2
2,776,124	-		MIT1002_02489	0.34	-0.4
2,776,126	+		MIT1002_02489	0.34	+0.4
2,776,126	+		MIT1002_02489	0.34	+1.1
2,776,126	+		MIT1002_02489	0.34	-0.8
2,776,126	+		MIT1002_02489	0.34	-0.9
2,776,131	+		MIT1002_02489	0.35	-1.6
2,776,239	-		MIT1002_02489	0.53	-2.0
2,776,277	+		MIT1002_02489	0.60	+0.2
2,776,295	-		MIT1002_02489	0.63	-0.5
2,776,318	+		MIT1002_02489	0.67	-0.4
2,776,328	+		MIT1002_02489	0.68	-0.1
2,776,336	-		MIT1002_02489	0.70	-1.4
2,776,444	+		MIT1002_02489	0.88	+0.6
2,776,517	+				-3.0
2,776,517	+				-2.0
2,776,524	-				+0.3
2,776,525	-				-1.5
2,776,525	-				-1.5
2,776,525	-				+0.2
2,776,525	-				-1.4
2,776,653	+				+0.2
2,776,676	-				-0.5
2,776,677	-				-1.1
2,776,687	-				-0.9
2,776,765	+				-0.8
2,776,771	+				-0.4
2,776,779	-				+0.4
2,776,792	+				-0.1
2,776,799	-				-1.9
2,776,810	-				+0.0
2,776,841	-				-1.9
2,777,001	+		MIT1002_02490	0.24	-1.7
2,777,023	+		MIT1002_02490	0.26	+1.0
2,777,023	+		MIT1002_02490	0.26	-2.2
2,777,023	+		MIT1002_02490	0.26	+0.0
2,777,031	-		MIT1002_02490	0.26	+0.1
2,777,031	-		MIT1002_02490	0.26	-0.5
2,777,041	-		MIT1002_02490	0.27	-1.6
2,777,058	+		MIT1002_02490	0.29	+0.2
2,777,066	-		MIT1002_02490	0.29	-1.4
2,777,066	-		MIT1002_02490	0.29	-0.2
2,777,066	-		MIT1002_02490	0.29	-0.8
2,777,090	+		MIT1002_02490	0.32	-2.6
2,777,091	+		MIT1002_02490	0.32	-0.3
2,777,124	+		MIT1002_02490	0.35	-1.0
2,777,132	-		MIT1002_02490	0.35	-1.3
2,777,132	-		MIT1002_02490	0.35	-1.9
2,777,234	-		MIT1002_02490	0.45	-2.7
2,777,234	-		MIT1002_02490	0.45	-0.5
2,777,244	-		MIT1002_02490	0.46	-1.6
2,777,244	-		MIT1002_02490	0.46	+1.1
2,777,292	-		MIT1002_02490	0.50	-0.8
2,777,409	+		MIT1002_02490	0.60	-1.4
2,777,498	-		MIT1002_02490	0.68	+0.1
2,777,516	+		MIT1002_02490	0.70	-0.5
2,777,525	-		MIT1002_02490	0.71	-0.0
2,777,545	+		MIT1002_02490	0.73	-3.2
2,777,611	+		MIT1002_02490	0.79	-1.9
2,777,621	+		MIT1002_02490	0.80	-0.9
2,777,629	-		MIT1002_02490	0.80	-0.6
2,777,747	-				-0.8
2,777,752	-				-2.0
2,777,862	+				-1.7
2,777,884	-				-1.4