Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02324

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
2,592,171	-		MIT1002_02323	0.29	-0.3
2,592,272	-		MIT1002_02323	0.37	-0.7
2,592,369	-		MIT1002_02323	0.44	-1.3
2,592,429	-		MIT1002_02323	0.48	+0.1
2,592,432	+		MIT1002_02323	0.48	-0.5
2,592,473	+		MIT1002_02323	0.51	-1.7
2,592,499	-		MIT1002_02323	0.53	+0.4
2,592,499	-		MIT1002_02323	0.53	-1.5
2,592,578	+		MIT1002_02323	0.59	-0.2
2,592,699	+		MIT1002_02323	0.68	+0.5
2,592,725	+		MIT1002_02323	0.70	-0.4
2,592,763	+		MIT1002_02323	0.72	+0.4
2,592,790	-		MIT1002_02323	0.74	-0.0
2,592,857	-		MIT1002_02323	0.79	-1.1
2,592,857	-		MIT1002_02323	0.79	-0.6
2,592,867	-		MIT1002_02323	0.80	+1.0
2,592,921	-		MIT1002_02323	0.84	+0.7
2,592,973	+		MIT1002_02323	0.88	-0.8
2,592,973	+		MIT1002_02323	0.88	-1.0
2,592,973	+		MIT1002_02323	0.88	+0.3
2,592,981	-		MIT1002_02323	0.88	+0.2
2,592,981	-		MIT1002_02323	0.88	+0.1
2,593,133	-				+0.3
2,593,135	+				+0.2
2,593,158	-				-1.0
2,593,229	+				-0.0
2,593,278	+		MIT1002_02324	0.11	-0.4
2,593,278	+		MIT1002_02324	0.11	+0.7
2,593,278	+		MIT1002_02324	0.11	+0.0
2,593,278	+		MIT1002_02324	0.11	-0.3
2,593,286	-		MIT1002_02324	0.12	-0.0
2,593,286	-		MIT1002_02324	0.12	+0.5
2,593,389	+		MIT1002_02324	0.20	+0.2
2,593,391	+		MIT1002_02324	0.20	+0.3
2,593,391	+		MIT1002_02324	0.20	-2.8
2,593,391	+		MIT1002_02324	0.20	-3.4
2,593,530	-		MIT1002_02324	0.31	-2.6
2,593,631	-		MIT1002_02324	0.39	+0.0
2,593,790	-		MIT1002_02324	0.52	+1.2
2,593,829	-		MIT1002_02324	0.55	+0.5
2,593,829	-		MIT1002_02324	0.55	-1.2
2,593,856	+		MIT1002_02324	0.57	-0.9
2,593,856	+		MIT1002_02324	0.57	+0.5
2,593,865	+		MIT1002_02324	0.58	+0.9
2,593,912	+		MIT1002_02324	0.62	-1.2
2,594,015	+		MIT1002_02324	0.70	-0.5
2,594,149	-		MIT1002_02324	0.81	+0.2
2,594,156	-		MIT1002_02324	0.82	+1.3
2,594,156	-		MIT1002_02324	0.82	-3.1
2,594,165	+		MIT1002_02324	0.82	-0.1
2,594,189	-		MIT1002_02324	0.84	+1.3
2,594,280	+				-0.3
2,594,394	+				-0.9
2,594,394	+				+0.1
2,594,476	+		MIT1002_02325	0.13	+0.7
2,594,478	-		MIT1002_02325	0.13	-1.9
2,594,484	-		MIT1002_02325	0.14	-1.3
2,594,484	-		MIT1002_02325	0.14	+0.2
2,594,488	+		MIT1002_02325	0.15	-0.7
2,594,488	+		MIT1002_02325	0.15	+1.7
2,594,496	-		MIT1002_02325	0.16	-2.1
2,594,496	-		MIT1002_02325	0.16	-0.8
2,594,533	-		MIT1002_02325	0.21	-1.6
2,594,561	+		MIT1002_02325	0.25	-0.5
2,594,574	-		MIT1002_02325	0.27	+0.0
2,594,606	-		MIT1002_02325	0.32	-0.4
2,594,745	-		MIT1002_02325	0.52	-0.2
2,594,828	-		MIT1002_02325	0.64	-0.4
2,594,845	-		MIT1002_02325	0.66	-0.7
2,594,877	+		MIT1002_02325	0.71	-0.2
2,594,884	+		MIT1002_02325	0.72	+0.4
2,594,894	+		MIT1002_02325	0.73	+0.8
2,594,906	+		MIT1002_02325	0.75	-0.7
2,595,032	-				+1.1
2,595,090	+				-0.8
2,595,128	+				+0.1
2,595,189	+				-0.5
2,595,382	-		MIT1002_02326	0.24	-2.8