Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02311

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
2,577,376	-		MIT1002_02309	0.83	-0.2
2,577,415	-		MIT1002_02309	0.87	+1.3
2,577,444	-		MIT1002_02309	0.89	-1.4
2,577,455	-				-1.8
2,577,524	+				+0.6
2,577,524	+				+0.6
2,577,524	+				-1.0
2,577,530	+				-1.5
2,577,538	-				+0.2
2,577,705	-				-2.7
2,577,774	+		MIT1002_02310	0.19	-1.0
2,577,774	+		MIT1002_02310	0.19	+1.7
2,577,774	+		MIT1002_02310	0.19	+0.6
2,577,775	+		MIT1002_02310	0.19	+0.7
2,577,775	+		MIT1002_02310	0.19	+0.0
2,577,782	-		MIT1002_02310	0.20	+0.6
2,577,783	-		MIT1002_02310	0.20	+1.0
2,577,783	-		MIT1002_02310	0.20	+0.1
2,577,806	+		MIT1002_02310	0.24	-0.2
2,577,806	+		MIT1002_02310	0.24	+0.2
2,577,814	-		MIT1002_02310	0.25	-2.3
2,577,849	-		MIT1002_02310	0.30	-0.2
2,577,855	-		MIT1002_02310	0.31	+1.7
2,577,877	+		MIT1002_02310	0.35	+2.4
2,577,877	+		MIT1002_02310	0.35	+0.2
2,577,877	+		MIT1002_02310	0.35	+0.2
2,577,885	-		MIT1002_02310	0.36	+1.9
2,577,885	-		MIT1002_02310	0.36	+1.3
2,577,912	+		MIT1002_02310	0.40	-1.6
2,577,912	+		MIT1002_02310	0.40	-0.2
2,577,931	+		MIT1002_02310	0.43	+0.7
2,577,939	-		MIT1002_02310	0.44	+1.0
2,577,939	-		MIT1002_02310	0.44	+0.2
2,578,009	+		MIT1002_02310	0.55	+0.8
2,578,044	-		MIT1002_02310	0.60	-1.1
2,578,060	+		MIT1002_02310	0.62	+0.2
2,578,060	+		MIT1002_02310	0.62	+0.4
2,578,075	+		MIT1002_02310	0.65	+0.8
2,578,075	+		MIT1002_02310	0.65	-2.6
2,578,075	+		MIT1002_02310	0.65	+0.3
2,578,078	-		MIT1002_02310	0.65	+1.9
2,578,078	-		MIT1002_02310	0.65	+0.5
2,578,083	-		MIT1002_02310	0.66	-0.2
2,578,083	-		MIT1002_02310	0.66	+1.0
2,578,134	+		MIT1002_02310	0.74	+0.9
2,578,142	+		MIT1002_02310	0.75	+0.5
2,578,142	-		MIT1002_02310	0.75	-0.1
2,578,377	+		MIT1002_02311	0.11	+0.1
2,578,385	-		MIT1002_02311	0.13	-0.0
2,578,470	-		MIT1002_02311	0.32	+1.7
2,578,513	+		MIT1002_02311	0.42	+0.2
2,578,513	+		MIT1002_02311	0.42	-0.0
2,578,521	-		MIT1002_02311	0.44	+0.7
2,578,521	-		MIT1002_02311	0.44	+1.0
2,578,521	-		MIT1002_02311	0.44	+1.2
2,578,533	+		MIT1002_02311	0.47	+0.4
2,578,638	-		MIT1002_02311	0.71	+0.0
2,578,649	+		MIT1002_02311	0.74	+2.4
2,578,650	-		MIT1002_02311	0.74	-1.0
2,578,657	+		MIT1002_02311	0.76	-1.7
2,578,703	-		MIT1002_02311	0.86	-0.5
2,578,766	+				+1.1
2,578,782	+				+1.1
2,578,808	+				+3.0
2,578,808	+				-0.2
2,578,808	+				+1.1
2,578,816	-				-0.6
2,579,030	-				-0.9
2,579,062	+				-0.3
2,579,088	-				+1.8
2,579,088	-				+1.3
2,579,132	+		MIT1002_02312	0.18	+0.6
2,579,140	-		MIT1002_02312	0.20	-0.2
2,579,296	+		MIT1002_02312	0.58	+0.1
2,579,301	+		MIT1002_02312	0.59	-3.5
2,579,311	+		MIT1002_02312	0.62	+1.9
2,579,311	-		MIT1002_02312	0.62	-3.2
2,579,319	-		MIT1002_02312	0.64	-0.2
2,579,319	-		MIT1002_02312	0.64	+0.3
2,579,373	+		MIT1002_02312	0.77	-0.2
2,579,391	-		MIT1002_02312	0.81	+0.4
2,579,405	-		MIT1002_02312	0.85	-0.1
2,579,405	-		MIT1002_02312	0.85	+1.0
2,579,415	-		MIT1002_02312	0.87	+0.7
2,579,450	+				-0.5
2,579,484	+				+2.0
2,579,492	-				-1.0
2,579,497	-				-0.5
2,579,516	+				-0.2
2,579,521	+				-2.2
2,579,529	-				+0.2
2,579,594	-				+0.3
2,579,596	-				-0.3
2,579,596	-				-0.1
2,579,596	-				+0.7
2,579,596	-				-0.8
2,579,596	-				+1.4
2,579,600	+				-1.9
2,579,686	-				-1.0
2,579,693	+				-0.7
2,579,718	+				-0.5