Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02108

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
2,366,655	+		MIT1002_02107	0.45	+0.1
2,366,775	-		MIT1002_02107	0.52	-1.1
2,366,930	+		MIT1002_02107	0.60	+0.1
2,366,995	-		MIT1002_02107	0.64	-1.1
2,367,035	+		MIT1002_02107	0.66	-0.1
2,367,081	+		MIT1002_02107	0.69	+0.8
2,367,101	+		MIT1002_02107	0.70	-0.2
2,367,101	-		MIT1002_02107	0.70	+0.0
2,367,106	+		MIT1002_02107	0.70	-0.8
2,367,124	-		MIT1002_02107	0.71	-0.0
2,367,158	+		MIT1002_02107	0.73	-0.8
2,367,158	+		MIT1002_02107	0.73	+0.9
2,367,158	+		MIT1002_02107	0.73	-0.8
2,367,163	+		MIT1002_02107	0.74	+0.7
2,367,165	+		MIT1002_02107	0.74	+0.8
2,367,166	-		MIT1002_02107	0.74	+1.3
2,367,166	-		MIT1002_02107	0.74	-0.3
2,367,166	-		MIT1002_02107	0.74	+0.6
2,367,254	-		MIT1002_02107	0.79	-0.4
2,367,280	+		MIT1002_02107	0.80	-0.8
2,367,288	-		MIT1002_02107	0.81	-0.1
2,367,600	+				-0.1
2,367,770	-		MIT1002_02108	0.12	-0.2
2,367,813	+		MIT1002_02108	0.16	-0.1
2,367,813	+		MIT1002_02108	0.16	-1.3
2,367,833	+		MIT1002_02108	0.18	-1.1
2,367,964	+		MIT1002_02108	0.29	-0.5
2,368,029	+		MIT1002_02108	0.34	-1.1
2,368,046	-		MIT1002_02108	0.36	+0.7
2,368,202	+		MIT1002_02108	0.49	+1.8
2,368,210	-		MIT1002_02108	0.50	-0.2
2,368,240	+		MIT1002_02108	0.52	+1.1
2,368,298	-		MIT1002_02108	0.57	-0.5
2,368,319	-		MIT1002_02108	0.59	-1.0
2,368,324	-		MIT1002_02108	0.60	-1.8
2,368,338	+		MIT1002_02108	0.61	+0.4
2,368,367	-		MIT1002_02108	0.63	+1.0
2,368,598	+		MIT1002_02108	0.83	+0.9
2,368,603	+		MIT1002_02108	0.83	+1.1
2,368,603	+		MIT1002_02108	0.83	-1.0
2,368,606	-		MIT1002_02108	0.84	+0.4
2,368,613	+		MIT1002_02108	0.84	-0.3
2,368,613	+		MIT1002_02108	0.84	-0.8
2,368,621	-		MIT1002_02108	0.85	-1.2
2,368,623	+		MIT1002_02108	0.85	+2.8
2,368,625	+		MIT1002_02108	0.85	-2.6
2,368,633	-		MIT1002_02108	0.86	-0.8
2,368,646	+		MIT1002_02108	0.87	-0.0
2,368,673	-		MIT1002_02108	0.89	-1.4
2,368,730	-				-0.4
2,368,848	-				-0.4
2,368,905	-		MIT1002_02109	0.10	+0.1
2,368,948	+		MIT1002_02109	0.15	+1.8
2,368,948	+		MIT1002_02109	0.15	-0.1
2,368,948	+		MIT1002_02109	0.15	+0.2
2,368,951	-		MIT1002_02109	0.15	-1.0
2,368,966	-		MIT1002_02109	0.16	+0.1
2,369,070	-		MIT1002_02109	0.27	-0.5
2,369,070	-		MIT1002_02109	0.27	+1.0
2,369,132	+		MIT1002_02109	0.33	+0.4
2,369,144	+		MIT1002_02109	0.34	+0.9
2,369,233	-		MIT1002_02109	0.43	+0.2
2,369,248	-		MIT1002_02109	0.44	+0.7
2,369,248	-		MIT1002_02109	0.44	+0.3
2,369,318	-		MIT1002_02109	0.51	-0.1
2,369,333	-		MIT1002_02109	0.53	-0.5
2,369,365	+		MIT1002_02109	0.56	-0.5
2,369,389	+		MIT1002_02109	0.58	-2.1
2,369,440	-		MIT1002_02109	0.63	-0.3
2,369,464	-		MIT1002_02109	0.65	+1.8
2,369,464	-		MIT1002_02109	0.65	+0.1
2,369,534	+		MIT1002_02109	0.72	-1.7
2,369,534	+		MIT1002_02109	0.72	+0.3
2,369,534	+		MIT1002_02109	0.72	-1.2
2,369,542	-		MIT1002_02109	0.73	-0.2
2,369,600	+		MIT1002_02109	0.79	-2.4
2,369,615	+		MIT1002_02109	0.80	+1.0
2,369,661	-		MIT1002_02109	0.85	+0.3
2,369,782	+				-0.2
2,369,797	+				-0.8