Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02032

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
2,276,217	-		MIT1002_02031	0.37	+0.5
2,276,224	-		MIT1002_02031	0.38	+0.2
2,276,250	+		MIT1002_02031	0.40	+0.9
2,276,250	+		MIT1002_02031	0.40	+0.6
2,276,258	-		MIT1002_02031	0.40	+0.7
2,276,287	+		MIT1002_02031	0.42	+0.2
2,276,342	+		MIT1002_02031	0.46	+0.4
2,276,423	+		MIT1002_02031	0.52	+1.5
2,276,431	-		MIT1002_02031	0.53	-0.4
2,276,431	-		MIT1002_02031	0.53	-0.8
2,276,431	-		MIT1002_02031	0.53	+0.7
2,276,431	-		MIT1002_02031	0.53	-0.4
2,276,494	+		MIT1002_02031	0.57	-0.0
2,276,494	+		MIT1002_02031	0.57	-0.1
2,276,494	+		MIT1002_02031	0.57	-1.0
2,276,494	+		MIT1002_02031	0.57	+0.4
2,276,497	-		MIT1002_02031	0.58	+0.2
2,276,502	-		MIT1002_02031	0.58	+0.9
2,276,502	-		MIT1002_02031	0.58	+0.2
2,276,502	-		MIT1002_02031	0.58	+0.6
2,276,502	-		MIT1002_02031	0.58	-2.2
2,276,502	-		MIT1002_02031	0.58	+0.4
2,276,502	-		MIT1002_02031	0.58	+0.4
2,276,502	-		MIT1002_02031	0.58	+0.8
2,276,515	+		MIT1002_02031	0.59	+0.4
2,276,552	+		MIT1002_02031	0.62	+0.6
2,276,576	+		MIT1002_02031	0.63	+0.3
2,276,758	+		MIT1002_02031	0.77	-0.1
2,276,904	+		MIT1002_02031	0.87	-0.6
2,276,904	+		MIT1002_02031	0.87	+0.9
2,276,906	+		MIT1002_02031	0.88	+0.7
2,276,927	+		MIT1002_02031	0.89	-0.5
2,276,935	-		MIT1002_02031	0.90	-0.2
2,276,958	-				+0.7
2,276,960	-				-0.9
2,277,022	-				+0.0
2,277,072	-				-1.3
2,277,072	-				-0.4
2,277,078	+				-1.6
2,277,331	+		MIT1002_02032	0.17	+1.9
2,277,427	-		MIT1002_02032	0.26	-0.2
2,277,455	+		MIT1002_02032	0.29	-0.2
2,277,551	+		MIT1002_02032	0.38	+1.2
2,277,605	+		MIT1002_02032	0.43	+1.1
2,277,607	-		MIT1002_02032	0.43	+0.0
2,277,706	-		MIT1002_02032	0.53	+0.6
2,277,717	+		MIT1002_02032	0.54	-0.2
2,277,739	+		MIT1002_02032	0.56	+0.8
2,277,764	+		MIT1002_02032	0.58	+0.8
2,277,805	+		MIT1002_02032	0.62	+0.8
2,277,805	+		MIT1002_02032	0.62	-1.1
2,277,813	-		MIT1002_02032	0.63	+0.7
2,277,813	-		MIT1002_02032	0.63	-0.7
2,277,878	-		MIT1002_02032	0.69	+1.8
2,277,933	-		MIT1002_02032	0.74	-0.1
2,277,977	-		MIT1002_02032	0.79	+0.7
2,278,005	+		MIT1002_02032	0.81	+1.3
2,278,013	-		MIT1002_02032	0.82	-0.6
2,278,064	-		MIT1002_02032	0.87	-0.1
2,278,064	-		MIT1002_02032	0.87	+0.1
2,278,131	+				+0.6
2,278,139	-				-0.4
2,278,139	-				+1.4
2,278,139	-				+0.8
2,278,139	-				+0.4
2,278,161	+				-0.0
2,278,377	+				+1.4
2,278,481	-		MIT1002_02033	0.11	+0.9
2,278,490	+		MIT1002_02033	0.12	-1.0
2,278,519	-		MIT1002_02033	0.13	+0.9
2,278,547	+		MIT1002_02033	0.14	+0.8
2,278,697	+		MIT1002_02033	0.21	-0.2
2,278,697	+		MIT1002_02033	0.21	+0.4
2,278,705	-		MIT1002_02033	0.21	+0.6
2,278,705	-		MIT1002_02033	0.21	+0.2
2,278,705	-		MIT1002_02033	0.21	+3.3
2,278,705	-		MIT1002_02033	0.21	+0.4
2,278,742	-		MIT1002_02033	0.23	+1.8
2,278,757	-		MIT1002_02033	0.23	-0.2
2,278,759	+		MIT1002_02033	0.23	+0.2
2,278,762	+		MIT1002_02033	0.24	+0.4
2,278,762	+		MIT1002_02033	0.24	+0.7
2,278,878	+		MIT1002_02033	0.29	+1.0
2,278,946	-		MIT1002_02033	0.31	+0.6
2,278,961	-		MIT1002_02033	0.32	-0.5
2,279,084	+		MIT1002_02033	0.37	+2.6
2,279,092	-		MIT1002_02033	0.38	+0.0
2,279,092	-		MIT1002_02033	0.38	+0.7
2,279,097	+		MIT1002_02033	0.38	+0.6
2,279,113	-		MIT1002_02033	0.39	-0.1
2,279,144	-		MIT1002_02033	0.40	+1.3