Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01839

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
2,047,836	-				-1.2
2,047,949	-				-1.8
2,047,949	-				-0.7
2,047,962	+				-0.4
2,047,963	+				-0.7
2,047,968	+				+0.2
2,047,971	-				-0.0
2,047,975	+				+1.4
2,047,975	+				-1.9
2,047,983	-				-0.1
2,048,027	-				-0.0
2,048,093	-				+0.1
2,048,124	+				+1.1
2,048,148	+				-2.0
2,048,194	-				+0.4
2,048,240	+				+0.6
2,048,266	-				-1.9
2,048,308	-				-0.7
2,048,308	-				-0.3
2,048,308	-				-0.0
2,048,352	+				+0.2
2,048,380	+		MIT1002_01839	0.16	-1.4
2,048,400	+		MIT1002_01839	0.20	-1.4
2,048,400	+		MIT1002_01839	0.20	-0.6
2,048,400	+		MIT1002_01839	0.20	+0.8
2,048,408	-		MIT1002_01839	0.22	-3.3
2,048,408	-		MIT1002_01839	0.22	+1.0
2,048,408	-		MIT1002_01839	0.22	-1.0
2,048,465	-		MIT1002_01839	0.35	-0.1
2,048,472	+		MIT1002_01839	0.36	-2.3
2,048,529	+		MIT1002_01839	0.49	-0.5
2,048,561	+		MIT1002_01839	0.56	-0.2
2,048,578	+		MIT1002_01839	0.60	-1.9
2,048,578	+		MIT1002_01839	0.60	+1.5
2,048,586	-		MIT1002_01839	0.62	-0.3
2,048,586	-		MIT1002_01839	0.62	-1.8
2,048,652	-		MIT1002_01839	0.76	-1.2
2,048,658	-		MIT1002_01839	0.78	-2.1
2,048,663	-		MIT1002_01839	0.79	-1.4
2,048,708	-		MIT1002_01839	0.89	-0.8
2,048,727	-				-0.4
2,048,778	-				-1.0
2,048,833	-				-0.8
2,048,833	-				+0.2
2,048,838	+				+0.2
2,048,846	-				-2.6
2,048,846	-				+0.2
2,048,917	-				-0.7
2,048,925	-				+1.8
2,048,981	+				-1.2
2,048,988	-				+0.7
2,048,989	-				+0.0
2,048,989	-				-1.7
2,049,036	+				+2.2
2,049,036	+				+1.2
2,049,036	+				+1.4
2,049,036	+				-1.2
2,049,044	-				+1.1
2,049,044	-				+0.4
2,049,046	-				+0.5
2,049,054	-				+1.0
2,049,061	-				-2.0
2,049,194	+				-0.8
2,049,280	+				-0.4
2,049,298	-				+1.4
2,049,382	+				-3.5
2,049,390	-				-1.3
2,049,390	-				-0.7
2,049,430	+				-1.1
2,049,498	-				-0.8
2,049,579	-		MIT1002_01840	0.11	-1.8
2,049,637	+		MIT1002_01840	0.15	-1.7
2,049,698	+		MIT1002_01840	0.18	-3.3