Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01818

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
2,026,076	-				-1.0
2,026,101	+				-3.7
2,026,114	-				-1.3
2,026,188	+				-1.2
2,026,188	+				-1.2
2,026,198	+				+0.1
2,026,234	+				+0.5
2,026,234	+				+0.8
2,026,242	-				-0.5
2,026,242	-				-1.8
2,026,242	-				-2.9
2,026,242	-				+0.4
2,026,242	-				-1.7
2,026,256	+				-0.9
2,026,256	+				+0.2
2,026,256	+				+0.2
2,026,256	+				-1.6
2,026,257	+				-0.5
2,026,257	+				-1.2
2,026,257	-				+0.2
2,026,264	-				-0.1
2,026,264	-				+0.7
2,026,264	-				-0.4
2,026,264	-				-1.2
2,026,267	+				-0.1
2,026,361	+				+1.8
2,026,404	+				-0.5
2,026,567	-				+1.6
2,026,617	+		MIT1002_01817	0.43	+2.5
2,026,632	-		MIT1002_01817	0.53	+0.8
2,026,827	-				-1.8
2,026,855	-				+0.9
2,026,894	+				-1.1
2,026,902	-				-0.7
2,026,902	-				+0.6
2,026,929	+				-0.4
2,026,937	-				-0.3
2,027,017	-				+1.6
2,027,083	+		MIT1002_01818	0.20	+0.5
2,027,083	+		MIT1002_01818	0.20	-1.2
2,027,091	-		MIT1002_01818	0.24	-0.3
2,027,091	-		MIT1002_01818	0.24	-1.7
2,027,091	-		MIT1002_01818	0.24	+0.8
2,027,126	+		MIT1002_01818	0.40	+2.6
2,027,126	+		MIT1002_01818	0.40	+0.9
2,027,141	+		MIT1002_01818	0.47	+0.6
2,027,149	-		MIT1002_01818	0.51	-1.2
2,027,281	+				+1.1
2,027,286	+				+0.5
2,027,286	+				-0.5
2,027,320	+				-0.4
2,027,320	+				+1.0
2,027,320	+				+0.3
2,027,328	-				-1.0
2,027,328	-				+0.4
2,027,334	+				-0.5
2,027,370	-				-1.8
2,027,435	-				-0.2
2,027,487	+				+1.0
2,027,497	+				-2.3
2,027,505	-				-1.4
2,027,553	-				+1.1
2,027,602	+				-0.8
2,027,602	+				-0.3
2,027,610	-				+0.2
2,027,632	+				+1.4
2,027,632	+				+0.8
2,027,639	+				+1.6
2,027,640	-				+1.6
2,027,732	-		MIT1002_01819	0.14	+0.7
2,027,732	-		MIT1002_01819	0.14	+0.1
2,027,778	-		MIT1002_01819	0.16	+1.0
2,027,844	+		MIT1002_01819	0.19	-1.5
2,027,844	+		MIT1002_01819	0.19	+0.1
2,027,844	+		MIT1002_01819	0.19	+0.4
2,027,852	-		MIT1002_01819	0.19	+1.8
2,027,852	-		MIT1002_01819	0.19	+1.3
2,027,940	+		MIT1002_01819	0.23	+0.6
2,028,030	+		MIT1002_01819	0.27	-2.6
2,028,165	+		MIT1002_01819	0.33	+1.2
2,028,211	-		MIT1002_01819	0.35	+1.0
2,028,221	+		MIT1002_01819	0.35	+0.3
2,028,221	+		MIT1002_01819	0.35	+0.2
2,028,221	+		MIT1002_01819	0.35	-0.8
2,028,229	-		MIT1002_01819	0.36	-0.7
2,028,250	-		MIT1002_01819	0.37	-3.6