Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01646

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
1,817,035	+		MIT1002_01645	0.47	+1.2
1,817,180	-		MIT1002_01645	0.55	-0.7
1,817,243	-		MIT1002_01645	0.58	-1.6
1,817,249	+		MIT1002_01645	0.59	-1.0
1,817,250	-		MIT1002_01645	0.59	+2.6
1,817,262	-		MIT1002_01645	0.60	-2.0
1,817,387	-		MIT1002_01645	0.67	-1.7
1,817,387	-		MIT1002_01645	0.67	-1.3
1,817,512	-		MIT1002_01645	0.74	-1.5
1,817,515	+		MIT1002_01645	0.74	+1.1
1,817,624	-		MIT1002_01645	0.80	-1.5
1,817,663	+		MIT1002_01645	0.83	-3.2
1,817,766	+		MIT1002_01645	0.88	-2.3
1,817,866	-				-1.7
1,818,032	-				-1.0
1,818,124	+				-2.4
1,818,124	+				+0.9
1,818,132	-				+0.4
1,818,132	-				-0.7
1,818,132	-				-1.6
1,818,158	-				-0.6
1,818,160	-				-0.2
1,818,318	-				+0.9
1,818,328	+		MIT1002_01646	0.10	-0.0
1,818,349	+		MIT1002_01646	0.11	-1.1
1,818,357	-		MIT1002_01646	0.11	-0.1
1,818,391	-		MIT1002_01646	0.12	-0.6
1,818,406	-		MIT1002_01646	0.12	-0.0
1,818,414	+		MIT1002_01646	0.13	-1.6
1,818,437	-		MIT1002_01646	0.13	-0.7
1,818,582	+		MIT1002_01646	0.17	-2.9
1,818,629	+		MIT1002_01646	0.19	-0.2
1,818,687	-		MIT1002_01646	0.20	-1.0
1,818,702	+		MIT1002_01646	0.21	-1.7
1,818,710	-		MIT1002_01646	0.21	-0.8
1,818,786	+		MIT1002_01646	0.23	+0.1
1,818,949	+		MIT1002_01646	0.28	-0.2
1,818,954	+		MIT1002_01646	0.28	-1.7
1,818,957	-		MIT1002_01646	0.28	+0.3
1,818,957	-		MIT1002_01646	0.28	+0.2
1,818,957	-		MIT1002_01646	0.28	-1.5
1,819,144	-		MIT1002_01646	0.34	-0.5
1,819,154	+		MIT1002_01646	0.34	-1.5
1,819,208	+		MIT1002_01646	0.35	+1.3
1,819,208	+		MIT1002_01646	0.35	-0.1
1,819,216	-		MIT1002_01646	0.36	-0.2
1,819,231	+		MIT1002_01646	0.36	+0.4
1,819,285	-		MIT1002_01646	0.38	+1.8
1,819,328	-		MIT1002_01646	0.39	-1.0
1,819,433	+		MIT1002_01646	0.42	+0.5
1,819,433	+		MIT1002_01646	0.42	-0.2
1,819,441	-		MIT1002_01646	0.42	-0.3
1,819,482	+		MIT1002_01646	0.43	-0.0
1,819,545	+		MIT1002_01646	0.45	-1.2
1,819,561	+		MIT1002_01646	0.45	-1.5
1,819,695	+		MIT1002_01646	0.49	+1.4
1,819,695	+		MIT1002_01646	0.49	+1.3
1,819,769	+		MIT1002_01646	0.51	-1.0
1,819,800	+		MIT1002_01646	0.52	+1.1
1,819,806	-		MIT1002_01646	0.52	+1.4
1,819,819	-		MIT1002_01646	0.53	-1.6
1,819,940	+		MIT1002_01646	0.56	-0.5
1,819,971	-		MIT1002_01646	0.57	-0.2
1,820,051	+		MIT1002_01646	0.59	-2.4
1,820,220	+		MIT1002_01646	0.64	-0.2
1,820,223	-		MIT1002_01646	0.64	+1.6
1,820,263	+		MIT1002_01646	0.66	-0.4
1,820,263	+		MIT1002_01646	0.66	-1.0
1,820,263	+		MIT1002_01646	0.66	+0.3
1,820,447	-		MIT1002_01646	0.71	+0.8
1,820,505	+		MIT1002_01646	0.72	-0.0
1,820,513	-		MIT1002_01646	0.73	+0.2
1,821,007	+		MIT1002_01646	0.87	-2.5
1,821,052	+		MIT1002_01646	0.88	-0.3
1,821,088	-		MIT1002_01646	0.89	-1.0
1,821,134	+				-0.6
1,821,238	-				-0.1
1,821,323	-				-0.1
1,821,323	-				+1.6
1,821,326	-				+0.7
1,821,328	-				+0.8
1,821,378	+				-0.3
1,821,378	+				+1.0
1,821,386	-				+0.9
1,821,415	-				+0.1
1,821,436	+				-0.0
1,821,518	-				-1.6
1,821,528	+				+1.2
1,821,591	-		MIT1002_01647	0.11	-0.4
1,821,941	-		MIT1002_01647	0.69	+0.2
1,822,128	+				+1.1
1,822,128	+				-1.5
1,822,136	-				-0.3
1,822,166	+				-3.0
1,822,166	+				+1.1
1,822,210	+				+0.7