Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01601

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
1,763,313	+		MIT1002_01600	0.18	-0.7
1,763,321	-		MIT1002_01600	0.18	-0.9
1,763,390	+		MIT1002_01600	0.24	+1.9
1,763,390	+		MIT1002_01600	0.24	-1.4
1,763,390	+		MIT1002_01600	0.24	-1.4
1,763,398	-		MIT1002_01600	0.25	-0.9
1,763,398	-		MIT1002_01600	0.25	-0.0
1,763,400	+		MIT1002_01600	0.25	-0.3
1,763,460	+		MIT1002_01600	0.30	-0.1
1,763,468	-		MIT1002_01600	0.31	+0.6
1,763,480	-		MIT1002_01600	0.32	-1.3
1,763,529	-		MIT1002_01600	0.36	+0.5
1,763,540	+		MIT1002_01600	0.37	-1.9
1,763,548	-		MIT1002_01600	0.37	-0.7
1,763,548	-		MIT1002_01600	0.37	-1.5
1,763,609	+		MIT1002_01600	0.43	-0.3
1,763,751	+		MIT1002_01600	0.55	+0.3
1,763,773	+		MIT1002_01600	0.56	-1.6
1,763,779	-		MIT1002_01600	0.57	-0.9
1,763,831	-		MIT1002_01600	0.61	-0.7
1,763,843	+		MIT1002_01600	0.62	-0.5
1,763,880	-		MIT1002_01600	0.65	+1.0
1,763,890	+		MIT1002_01600	0.66	-1.4
1,763,977	-		MIT1002_01600	0.74	+0.7
1,763,982	-		MIT1002_01600	0.74	-1.3
1,764,014	+		MIT1002_01600	0.77	+0.1
1,764,014	+		MIT1002_01600	0.77	-0.4
1,764,014	+		MIT1002_01600	0.77	-0.2
1,764,014	+		MIT1002_01600	0.77	+0.8
1,764,022	-		MIT1002_01600	0.77	+0.6
1,764,122	+		MIT1002_01600	0.86	-1.7
1,764,127	+		MIT1002_01600	0.86	+0.6
1,764,169	-				-0.1
1,764,210	+				-0.2
1,764,245	-				-0.0
1,764,350	-				-1.1
1,764,388	+		MIT1002_01601	0.14	+1.4
1,764,492	-		MIT1002_01601	0.28	+0.8
1,764,497	-		MIT1002_01601	0.28	+0.0
1,764,518	+		MIT1002_01601	0.31	-0.8
1,764,586	-		MIT1002_01601	0.40	-0.1
1,764,808	+		MIT1002_01601	0.70	+0.4
1,764,819	-		MIT1002_01601	0.71	-0.9
1,764,845	+		MIT1002_01601	0.75	-2.4
1,764,947	+		MIT1002_01601	0.88	-0.3
1,765,017	-				-0.6
1,765,025	-				-0.2
1,765,107	+				+0.6
1,765,161	-				-0.6
1,765,163	+				-0.1
1,765,198	+				-0.8
1,765,198	+				-0.1
1,765,206	-				-0.1
1,765,290	+		MIT1002_01602	0.15	+1.1
1,765,298	-		MIT1002_01602	0.16	-0.7
1,765,303	+		MIT1002_01602	0.17	+2.5
1,765,387	-		MIT1002_01602	0.26	+1.4
1,765,389	+		MIT1002_01602	0.26	+0.8
1,765,602	-		MIT1002_01602	0.51	+0.4
1,765,655	+		MIT1002_01602	0.56	+1.6
1,765,666	+		MIT1002_01602	0.58	-0.7
1,765,671	+		MIT1002_01602	0.58	+0.6
1,765,671	+		MIT1002_01602	0.58	+1.9
1,765,679	-		MIT1002_01602	0.59	-0.7
1,765,825	-		MIT1002_01602	0.76	+1.4
1,765,941	+		MIT1002_01602	0.89	-0.4
1,765,975	+				+0.8