Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01566

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
1,723,147	+				+0.9
1,723,195	-				+0.7
1,723,239	+				+0.5
1,723,271	+				+0.7
1,723,279	-				-0.1
1,723,279	-				+2.1
1,723,279	-				+0.5
1,723,293	+				+0.5
1,723,335	-				+0.9
1,723,394	+		MIT1002_01565	0.15	+0.9
1,723,404	+		MIT1002_01565	0.17	-0.2
1,723,404	+		MIT1002_01565	0.17	-0.1
1,723,404	+		MIT1002_01565	0.17	+0.9
1,723,404	+		MIT1002_01565	0.17	-0.1
1,723,412	-		MIT1002_01565	0.18	+1.6
1,723,412	-		MIT1002_01565	0.18	+0.9
1,723,412	-		MIT1002_01565	0.18	+0.2
1,723,494	+		MIT1002_01565	0.32	-1.8
1,723,494	+		MIT1002_01565	0.32	+0.4
1,723,539	+		MIT1002_01565	0.39	+0.2
1,723,539	+		MIT1002_01565	0.39	+0.3
1,723,541	+		MIT1002_01565	0.40	+1.3
1,723,547	-		MIT1002_01565	0.41	-0.1
1,723,592	+		MIT1002_01565	0.48	+0.5
1,723,638	+		MIT1002_01565	0.56	+1.1
1,723,723	-		MIT1002_01565	0.71	+0.1
1,723,843	-				+0.1
1,723,845	+				-2.1
1,723,845	+				-1.5
1,723,853	-				+0.1
1,723,891	+				-0.9
1,723,901	+				-0.3
1,723,935	+				-0.4
1,723,935	+				+0.1
1,723,935	+				-0.7
1,723,943	-				+0.3
1,724,002	-				+0.9
1,724,004	+				+0.6
1,724,165	+		MIT1002_01566	0.19	-2.2
1,724,165	+		MIT1002_01566	0.19	+0.3
1,724,165	+		MIT1002_01566	0.19	-0.4
1,724,168	-		MIT1002_01566	0.19	-0.2
1,724,173	-		MIT1002_01566	0.21	+0.6
1,724,173	-		MIT1002_01566	0.21	-0.9
1,724,173	-		MIT1002_01566	0.21	+1.0
1,724,173	-		MIT1002_01566	0.21	+1.7
1,724,173	-		MIT1002_01566	0.21	+0.4
1,724,261	+		MIT1002_01566	0.45	+1.1
1,724,371	+		MIT1002_01566	0.76	+0.3
1,724,378	-		MIT1002_01566	0.78	+1.6
1,724,429	-				+1.0
1,724,440	-				+1.1
1,724,453	+				-0.5
1,724,474	+				-0.6
1,724,579	+		MIT1002_01567	0.26	+0.5
1,724,589	-		MIT1002_01567	0.30	+0.5
1,724,665	+		MIT1002_01567	0.57	+1.5
1,724,711	+		MIT1002_01567	0.74	+0.1
1,724,721	-		MIT1002_01567	0.78	-0.2
1,724,731	-		MIT1002_01567	0.81	+1.4
1,724,827	+				-1.4
1,724,835	-				+0.1
1,724,841	+				-0.2
1,724,897	-				+0.6
1,724,917	+				-0.5
1,724,917	+				-0.3
1,724,927	+				+0.6
1,724,927	+				+0.6
1,724,927	+				+1.1
1,724,935	-				+0.9
1,725,032	+				+1.7
1,725,072	-				+0.5
1,725,120	+				+1.5
1,725,123	-				-0.4
1,725,198	-				-0.6
1,725,207	-		MIT1002_01568	0.10	+0.3
1,725,207	-		MIT1002_01568	0.10	-1.7
1,725,252	-		MIT1002_01568	0.14	-0.4
1,725,439	-		MIT1002_01568	0.28	-2.2
1,725,441	+		MIT1002_01568	0.29	-1.4
1,725,449	-		MIT1002_01568	0.29	+0.6