Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01419

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
1,562,478	+		MIT1002_01417	0.41	-0.1
1,562,494	+		MIT1002_01417	0.42	-0.2
1,562,523	-		MIT1002_01417	0.46	-0.7
1,562,523	-		MIT1002_01417	0.46	-0.3
1,562,556	+		MIT1002_01417	0.49	+0.4
1,562,556	+		MIT1002_01417	0.49	-0.1
1,562,564	-		MIT1002_01417	0.50	-0.8
1,562,568	+		MIT1002_01417	0.51	+0.7
1,562,576	-		MIT1002_01417	0.52	-0.8
1,562,595	+		MIT1002_01417	0.54	+0.7
1,562,595	+		MIT1002_01417	0.54	-0.7
1,562,595	+		MIT1002_01417	0.54	-1.6
1,562,595	+		MIT1002_01417	0.54	+0.2
1,562,595	+		MIT1002_01417	0.54	+0.5
1,562,595	+		MIT1002_01417	0.54	+0.2
1,562,603	-		MIT1002_01417	0.55	+0.1
1,562,603	-		MIT1002_01417	0.55	+0.6
1,562,633	+		MIT1002_01417	0.58	-0.2
1,562,633	+		MIT1002_01417	0.58	-0.2
1,562,639	+		MIT1002_01417	0.59	+0.2
1,562,707	-		MIT1002_01417	0.66	-2.5
1,562,738	-		MIT1002_01417	0.70	+0.3
1,562,816	+		MIT1002_01417	0.78	-0.6
1,562,980	-				+0.9
1,562,990	-				+0.2
1,563,123	-		MIT1002_01418	0.24	-0.5
1,563,239	+		MIT1002_01418	0.56	-0.7
1,563,289	+		MIT1002_01418	0.69	+0.5
1,563,397	-				-0.1
1,563,614	+		MIT1002_01419	0.13	-0.9
1,563,648	+		MIT1002_01419	0.17	-1.2
1,563,652	+		MIT1002_01419	0.17	-0.7
1,563,699	-		MIT1002_01419	0.22	+1.3
1,563,721	+		MIT1002_01419	0.24	+0.2
1,563,726	+		MIT1002_01419	0.24	-0.3
1,563,726	+		MIT1002_01419	0.24	-3.9
1,563,726	+		MIT1002_01419	0.24	-1.3
1,563,726	+		MIT1002_01419	0.24	+1.3
1,563,734	-		MIT1002_01419	0.25	-2.2
1,563,825	+		MIT1002_01419	0.34	-0.3
1,563,860	-		MIT1002_01419	0.37	-0.0
1,563,868	+		MIT1002_01419	0.38	-2.4
1,563,989	+		MIT1002_01419	0.49	-0.7
1,564,093	+		MIT1002_01419	0.59	-1.8
1,564,116	+		MIT1002_01419	0.62	-2.5
1,564,127	+		MIT1002_01419	0.63	-3.3
1,564,127	+		MIT1002_01419	0.63	-2.2
1,564,127	+		MIT1002_01419	0.63	-2.1
1,564,135	-		MIT1002_01419	0.63	-1.4
1,564,151	-		MIT1002_01419	0.65	-0.4
1,564,159	+		MIT1002_01419	0.66	-2.7
1,564,161	-		MIT1002_01419	0.66	-0.9
1,564,276	+		MIT1002_01419	0.77	+0.1
1,564,281	+		MIT1002_01419	0.77	-1.2
1,564,323	+		MIT1002_01419	0.81	+1.0
1,564,396	+		MIT1002_01419	0.88	+0.2
1,564,449	-				-0.6
1,564,449	-				-1.8
1,564,484	+				+1.2
1,564,495	+				+0.3
1,564,495	+				-1.5
1,564,548	-				+0.6
1,564,667	+				+0.8
1,564,667	-				-0.1
1,564,693	-				+0.3
1,564,702	+				+0.0
1,564,774	+				+1.1
1,564,856	+				-0.4
1,564,934	-		MIT1002_01420	0.11	-3.0
1,564,971	-		MIT1002_01420	0.13	-5.0
1,564,992	+		MIT1002_01420	0.15	-3.4
1,565,073	+		MIT1002_01420	0.21	-3.0
1,565,081	-		MIT1002_01420	0.22	-3.8
1,565,081	-		MIT1002_01420	0.22	-2.7
1,565,115	-		MIT1002_01420	0.24	-2.6
1,565,124	-		MIT1002_01420	0.25	-3.3
1,565,176	+		MIT1002_01420	0.29	-2.2
1,565,176	+		MIT1002_01420	0.29	-6.2
1,565,176	+		MIT1002_01420	0.29	-2.5
1,565,178	-		MIT1002_01420	0.29	-4.3
1,565,472	+		MIT1002_01420	0.51	-3.2