Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01303

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
1,446,934	-		MIT1002_01302	0.40	+0.5
1,446,934	-		MIT1002_01302	0.40	+0.9
1,446,982	-		MIT1002_01302	0.44	+0.0
1,447,038	+		MIT1002_01302	0.48	-1.1
1,447,088	+		MIT1002_01302	0.52	+0.6
1,447,142	+		MIT1002_01302	0.56	+1.0
1,447,142	+		MIT1002_01302	0.56	+0.9
1,447,205	-		MIT1002_01302	0.61	-0.1
1,447,225	+		MIT1002_01302	0.63	-0.1
1,447,274	-		MIT1002_01302	0.67	-2.9
1,447,285	+		MIT1002_01302	0.68	+0.8
1,447,341	-		MIT1002_01302	0.72	+0.3
1,447,431	+		MIT1002_01302	0.79	+0.5
1,447,449	-		MIT1002_01302	0.81	+0.9
1,447,486	+		MIT1002_01302	0.84	-0.3
1,447,517	+		MIT1002_01302	0.86	+1.5
1,447,527	+		MIT1002_01302	0.87	+0.3
1,447,560	-		MIT1002_01302	0.90	-0.1
1,447,560	-		MIT1002_01302	0.90	+0.2
1,447,585	+				-0.3
1,447,600	+				+0.5
1,447,601	+				-0.1
1,447,609	-				+1.1
1,447,609	-				+0.9
1,447,643	+				-0.5
1,447,659	-				-0.5
1,447,659	-				-1.1
1,447,674	+				+1.2
1,447,717	+				-1.9
1,447,756	+				+0.7
1,447,756	+				-0.0
1,447,757	+				+0.6
1,447,783	-				-1.9
1,447,798	+				+1.3
1,447,845	+				+0.4
1,447,876	-				+0.6
1,447,987	-				+0.2
1,448,010	+				+0.8
1,448,018	-				+0.4
1,448,091	-				+0.7
1,448,091	-				-0.3
1,448,109	+				-1.5
1,448,115	-				+0.7
1,448,135	+				-0.3
1,448,166	-				+0.9
1,448,179	-				+2.0
1,448,194	+				+1.5
1,448,305	+		MIT1002_01303	0.13	-2.5
1,448,354	+		MIT1002_01303	0.15	+0.0
1,448,354	+		MIT1002_01303	0.15	+1.3
1,448,362	-		MIT1002_01303	0.15	-1.6
1,448,373	+		MIT1002_01303	0.15	+1.1
1,448,510	-		MIT1002_01303	0.20	+0.7
1,448,545	+		MIT1002_01303	0.21	+1.1
1,448,553	-		MIT1002_01303	0.21	+0.6
1,448,556	-		MIT1002_01303	0.21	+0.4
1,448,606	-		MIT1002_01303	0.23	-0.1
1,448,621	-		MIT1002_01303	0.23	+0.3
1,448,643	+		MIT1002_01303	0.24	-0.5
1,448,708	+		MIT1002_01303	0.26	-4.6
1,448,711	-		MIT1002_01303	0.26	-0.4
1,448,716	-		MIT1002_01303	0.26	-0.9
1,448,774	+		MIT1002_01303	0.28	+0.9
1,448,818	+		MIT1002_01303	0.30	-1.0
1,448,883	+		MIT1002_01303	0.32	-0.4
1,448,883	+		MIT1002_01303	0.32	-0.7
1,448,883	+		MIT1002_01303	0.32	-0.0
1,448,883	+		MIT1002_01303	0.32	+0.2
1,448,883	+		MIT1002_01303	0.32	+0.5
1,448,891	-		MIT1002_01303	0.32	-1.1
1,448,891	-		MIT1002_01303	0.32	+0.5
1,448,891	-		MIT1002_01303	0.32	+1.0
1,448,894	+		MIT1002_01303	0.32	+0.5
1,448,902	-		MIT1002_01303	0.32	-0.7
1,448,902	-		MIT1002_01303	0.32	-2.0
1,448,922	+		MIT1002_01303	0.33	-0.5
1,448,930	-		MIT1002_01303	0.33	+0.8
1,448,930	-		MIT1002_01303	0.33	-0.1
1,449,001	+		MIT1002_01303	0.35	-0.7
1,449,038	+		MIT1002_01303	0.37	+0.0
1,449,047	-		MIT1002_01303	0.37	-1.7
1,449,135	-		MIT1002_01303	0.40	+0.4
1,449,142	+		MIT1002_01303	0.40	-0.9
1,449,150	-		MIT1002_01303	0.40	-0.1
1,449,150	-		MIT1002_01303	0.40	-2.1
1,449,175	+		MIT1002_01303	0.41	+0.4
1,449,225	-		MIT1002_01303	0.43	+0.2
1,449,287	+		MIT1002_01303	0.45	+0.4
1,449,290	-		MIT1002_01303	0.45	-0.1
1,449,295	-		MIT1002_01303	0.45	-1.4
1,449,295	-		MIT1002_01303	0.45	+1.5
1,449,296	+		MIT1002_01303	0.45	-0.3
1,449,304	-		MIT1002_01303	0.45	-0.2
1,449,341	-		MIT1002_01303	0.46	-2.5
1,449,402	+		MIT1002_01303	0.48	-1.0
1,449,410	-		MIT1002_01303	0.49	+1.0
1,449,410	-		MIT1002_01303	0.49	+1.0
1,449,459	-		MIT1002_01303	0.50	-1.0
1,449,461	+		MIT1002_01303	0.50	+0.4
1,449,493	-		MIT1002_01303	0.51	+0.1
1,449,531	-		MIT1002_01303	0.52	-0.7
1,449,538	-		MIT1002_01303	0.53	+1.3
1,449,556	+		MIT1002_01303	0.53	-0.2
1,449,582	+		MIT1002_01303	0.54	+0.5
1,449,582	+		MIT1002_01303	0.54	-0.6
1,449,582	+		MIT1002_01303	0.54	+0.2
1,449,590	-		MIT1002_01303	0.54	+0.2
1,449,590	-		MIT1002_01303	0.54	+0.0
1,449,615	-		MIT1002_01303	0.55	+0.0
1,449,645	+		MIT1002_01303	0.56	-1.3
1,449,680	-		MIT1002_01303	0.57	-2.9
1,449,685	-		MIT1002_01303	0.57	-0.2
1,449,685	-		MIT1002_01303	0.57	+0.5
1,449,697	+		MIT1002_01303	0.58	+0.2
1,449,710	+		MIT1002_01303	0.58	-0.1
1,449,718	-		MIT1002_01303	0.58	+1.1
1,449,791	-		MIT1002_01303	0.61	-0.6
1,449,805	+		MIT1002_01303	0.61	-0.4
1,449,805	+		MIT1002_01303	0.61	-0.8
1,449,819	-		MIT1002_01303	0.62	-0.7
1,449,884	-		MIT1002_01303	0.64	+1.0
1,449,901	+		MIT1002_01303	0.64	+0.3
1,449,901	+		MIT1002_01303	0.64	-0.5
1,449,909	-		MIT1002_01303	0.65	+0.1
1,449,909	-		MIT1002_01303	0.65	+1.0
1,449,921	-		MIT1002_01303	0.65	+0.8
1,449,948	+		MIT1002_01303	0.66	+0.2
1,449,977	+		MIT1002_01303	0.67	-1.0
1,449,987	-		MIT1002_01303	0.67	+0.1
1,450,034	+		MIT1002_01303	0.69	-0.3
1,450,042	-		MIT1002_01303	0.69	-1.5
1,450,053	+		MIT1002_01303	0.69	-0.1
1,450,087	+		MIT1002_01303	0.70	+0.5
1,450,121	+		MIT1002_01303	0.71	+0.3
1,450,139	-		MIT1002_01303	0.72	-0.2
1,450,183	+		MIT1002_01303	0.73	+1.5
1,450,209	+		MIT1002_01303	0.74	-0.4
1,450,209	-		MIT1002_01303	0.74	-2.3
1,450,406	+		MIT1002_01303	0.81	-0.3
1,450,439	-		MIT1002_01303	0.82	-2.4
1,450,516	+		MIT1002_01303	0.84	-0.9
1,450,516	+		MIT1002_01303	0.84	-0.1
1,450,563	+		MIT1002_01303	0.86	+0.4
1,450,563	+		MIT1002_01303	0.86	-1.2
1,450,563	+		MIT1002_01303	0.86	-0.4
1,450,571	-		MIT1002_01303	0.86	-1.1
1,450,571	-		MIT1002_01303	0.86	+0.1
1,450,571	-		MIT1002_01303	0.86	+0.2
1,450,777	+				+0.7
1,450,777	+				+0.8
1,450,848	+				+0.3
1,450,856	-				-0.2
1,450,883	+				+0.2
1,450,883	+				-0.9
1,450,883	+				+1.5
1,450,883	+				-0.1
1,450,883	+				-0.3
1,450,883	+				+0.1
1,450,883	+				+1.4
1,450,883	+				-0.4
1,450,883	+				-0.0
1,450,883	+				-0.8
1,450,883	+				-1.1
1,450,883	+				-0.8
1,450,883	+				+1.2
1,450,883	+				-0.2
1,450,883	+				-3.7
1,450,883	+				-0.5
1,450,883	+				+0.2
1,450,883	+				+0.1
1,450,883	+				+0.1
1,450,883	+				-1.6
1,450,883	+				-0.5
1,450,883	+				+1.2
1,450,891	-				+0.8
1,450,891	-				+0.9
1,450,891	-				+0.5
1,450,891	-				-0.1
1,450,891	-				-0.9
1,450,891	-				+0.4
1,450,891	-				+0.7
1,450,891	-				+0.7
1,450,891	-				+1.1
1,450,891	-				+0.3
1,450,891	-				-0.8
1,450,891	-				-0.3
1,450,891	-				+0.1
1,450,891	-				+2.4
1,450,891	-				-0.3
1,450,891	-				+0.1
1,450,891	-				-0.1
1,450,891	-				+0.5
1,450,891	-				-0.6
1,450,893	+				-0.7
1,450,977	+				-0.9
1,451,012	+				-1.5
1,451,021	+				+0.1
1,451,039	-				+0.4
1,451,064	+				+1.3
1,451,097	+				-1.6
1,451,118	+		MIT1002_01304	0.11	-0.7
1,451,123	-		MIT1002_01304	0.11	+0.4
1,451,159	+		MIT1002_01304	0.15	-0.8
1,451,159	+		MIT1002_01304	0.15	-1.3
1,451,193	-		MIT1002_01304	0.18	+0.8
1,451,217	-		MIT1002_01304	0.20	-1.0
1,451,268	+		MIT1002_01304	0.25	-2.7
1,451,283	-		MIT1002_01304	0.26	-1.3
1,451,288	-		MIT1002_01304	0.27	-0.6
1,451,362	+		MIT1002_01304	0.34	-0.5
1,451,370	-		MIT1002_01304	0.34	-1.7
1,451,451	-		MIT1002_01304	0.42	-0.3
1,451,497	-		MIT1002_01304	0.46	+1.6
1,451,499	+		MIT1002_01304	0.47	+0.3
1,451,556	+		MIT1002_01304	0.52	+0.5
1,451,562	-		MIT1002_01304	0.53	-0.4
1,451,564	-		MIT1002_01304	0.53	+0.3
1,451,643	-		MIT1002_01304	0.60	+0.9
1,451,706	+		MIT1002_01304	0.66	-0.4
1,451,714	-		MIT1002_01304	0.67	-0.7
1,451,714	-		MIT1002_01304	0.67	+3.1
1,451,719	-		MIT1002_01304	0.67	+0.2
1,451,858	+		MIT1002_01304	0.81	+1.4
1,451,860	+		MIT1002_01304	0.81	-0.1
1,451,890	-		MIT1002_01304	0.84	-0.6
1,451,896	-		MIT1002_01304	0.84	-0.0
1,451,896	-		MIT1002_01304	0.84	+0.2
1,451,944	-		MIT1002_01304	0.89	-0.6
1,451,969	+				-0.4
1,451,969	+				+1.2
1,451,977	-				-0.4