Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01232

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
1,355,079	+		MIT1002_01231	0.36	+2.0
1,355,084	+		MIT1002_01231	0.36	-1.2
1,355,084	+		MIT1002_01231	0.36	+0.9
1,355,084	+		MIT1002_01231	0.36	-2.2
1,355,092	-		MIT1002_01231	0.36	+1.3
1,355,092	-		MIT1002_01231	0.36	+0.2
1,355,092	-		MIT1002_01231	0.36	+0.4
1,355,092	-		MIT1002_01231	0.36	+0.2
1,355,150	+		MIT1002_01231	0.40	+1.4
1,355,187	-		MIT1002_01231	0.43	+1.8
1,355,191	+		MIT1002_01231	0.43	+0.7
1,355,388	+		MIT1002_01231	0.55	+0.8
1,355,388	+		MIT1002_01231	0.55	+1.3
1,355,429	+		MIT1002_01231	0.58	+3.1
1,355,454	-		MIT1002_01231	0.60	+0.4
1,355,687	+		MIT1002_01231	0.75	+0.5
1,355,713	+		MIT1002_01231	0.76	-1.7
1,355,713	+		MIT1002_01231	0.76	+1.1
1,355,745	+		MIT1002_01231	0.79	+1.4
1,355,752	+		MIT1002_01231	0.79	+0.7
1,355,752	+		MIT1002_01231	0.79	+0.3
1,355,753	-		MIT1002_01231	0.79	+1.2
1,355,760	-		MIT1002_01231	0.80	-0.0
1,355,791	+		MIT1002_01231	0.82	-0.6
1,355,843	-		MIT1002_01231	0.85	+1.7
1,355,845	-		MIT1002_01231	0.85	-2.0
1,355,873	+		MIT1002_01231	0.87	+2.8
1,355,883	+		MIT1002_01231	0.87	+1.0
1,356,096	+				+0.6
1,356,108	-				-0.1
1,356,129	-				+2.2
1,356,133	+				+2.5
1,356,134	-				+0.8
1,356,141	-				+0.0
1,356,141	-				+2.4
1,356,141	-				+0.9
1,356,141	-				-0.7
1,356,141	-				+0.5
1,356,159	-				-0.4
1,356,166	+				-0.7
1,356,217	+		MIT1002_01232	0.11	+1.2
1,356,225	-		MIT1002_01232	0.11	+2.1
1,356,225	-		MIT1002_01232	0.11	+3.3
1,356,283	-		MIT1002_01232	0.16	+0.5
1,356,292	+		MIT1002_01232	0.17	+0.9
1,356,317	-		MIT1002_01232	0.19	+1.4
1,356,402	+		MIT1002_01232	0.25	+0.8
1,356,410	-		MIT1002_01232	0.26	-0.0
1,356,427	-		MIT1002_01232	0.27	-0.2
1,356,442	+		MIT1002_01232	0.28	-1.5
1,356,492	+		MIT1002_01232	0.32	+0.4
1,356,492	+		MIT1002_01232	0.32	+1.0
1,356,500	-		MIT1002_01232	0.33	+1.9
1,356,584	-		MIT1002_01232	0.39	-0.1
1,356,615	+		MIT1002_01232	0.42	+1.8
1,356,615	+		MIT1002_01232	0.42	+0.3
1,356,759	-		MIT1002_01232	0.53	+0.8
1,356,769	+		MIT1002_01232	0.54	-0.0
1,356,852	+		MIT1002_01232	0.60	+0.7
1,356,860	-		MIT1002_01232	0.61	+0.6
1,356,860	-		MIT1002_01232	0.61	+0.2
1,356,860	-		MIT1002_01232	0.61	+1.3
1,356,860	-		MIT1002_01232	0.61	+0.5
1,356,900	+		MIT1002_01232	0.64	+1.1
1,356,908	-		MIT1002_01232	0.64	+0.9
1,356,908	-		MIT1002_01232	0.64	+1.1
1,356,908	-		MIT1002_01232	0.64	+1.7
1,357,059	+		MIT1002_01232	0.76	+1.6
1,357,067	-		MIT1002_01232	0.77	+0.9
1,357,119	+		MIT1002_01232	0.81	+1.0
1,357,243	+				+1.1
1,357,251	-				+0.6
1,357,291	-				+1.1
1,357,323	-				-1.0
1,357,328	-				+1.9
1,357,335	+				+1.2
1,357,343	-				+1.0
1,357,343	-				-1.3
1,357,368	+				+0.9
1,357,371	-				-2.6
1,357,371	-				+2.0
1,357,392	+				+0.9
1,357,426	+				-1.7
1,357,426	+				+0.3
1,357,563	+				-1.4
1,357,571	-				-0.1
1,357,668	-		MIT1002_01233	0.11	+2.3
1,357,781	+		MIT1002_01233	0.17	+3.7
1,357,804	-		MIT1002_01233	0.18	-1.5
1,357,807	-		MIT1002_01233	0.19	+0.4
1,357,860	+		MIT1002_01233	0.21	+1.1
1,357,898	+		MIT1002_01233	0.23	+1.5
1,357,949	-		MIT1002_01233	0.26	+1.0
1,357,986	-		MIT1002_01233	0.28	+0.6
1,358,016	-		MIT1002_01233	0.29	+0.5
1,358,210	-		MIT1002_01233	0.40	+1.2
1,358,289	+		MIT1002_01233	0.44	-0.6
1,358,294	+		MIT1002_01233	0.44	-0.7
1,358,320	-		MIT1002_01233	0.45	+0.8
1,358,337	-		MIT1002_01233	0.46	-0.2