Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01163

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
1,278,471	+				-2.5
1,278,472	+				-1.7
1,278,474	+				-0.3
1,278,480	-				+0.7
1,278,480	-				-2.3
1,278,480	-				+0.3
1,278,482	-				-1.9
1,278,554	+		MIT1002_01162	0.20	+0.9
1,278,562	-		MIT1002_01162	0.21	+0.6
1,278,652	+		MIT1002_01162	0.37	-0.1
1,278,698	+		MIT1002_01162	0.46	+1.2
1,278,776	+		MIT1002_01162	0.59	-1.3
1,278,781	+		MIT1002_01162	0.60	+0.1
1,278,786	+		MIT1002_01162	0.61	+0.8
1,278,794	-		MIT1002_01162	0.63	+1.4
1,278,820	-		MIT1002_01162	0.67	-1.2
1,278,901	-		MIT1002_01162	0.82	-0.3
1,278,920	-		MIT1002_01162	0.85	+0.5
1,278,931	+		MIT1002_01162	0.87	+0.6
1,278,931	+		MIT1002_01162	0.87	-0.9
1,278,931	+		MIT1002_01162	0.87	+1.0
1,278,931	+		MIT1002_01162	0.87	+0.2
1,278,939	-		MIT1002_01162	0.89	+1.5
1,278,939	-		MIT1002_01162	0.89	-0.1
1,278,939	-		MIT1002_01162	0.89	-0.0
1,278,939	-		MIT1002_01162	0.89	+0.2
1,278,983	+				-0.2
1,279,044	+				-1.6
1,279,072	+				+1.4
1,279,143	-				-0.3
1,279,189	-				-0.2
1,279,273	+				+0.8
1,279,273	+				-0.4
1,279,273	+				+1.0
1,279,273	+				+0.8
1,279,281	-				-0.8
1,279,776	+		MIT1002_01163	0.41	-2.0
1,279,787	+		MIT1002_01163	0.43	-0.6
1,279,811	+		MIT1002_01163	0.46	-1.6
1,279,819	-		MIT1002_01163	0.47	-1.2
1,279,957	-		MIT1002_01163	0.65	-1.0
1,280,102	-		MIT1002_01163	0.84	-1.3
1,280,668	-		MIT1002_01164	0.32	-0.8
1,280,670	+		MIT1002_01164	0.32	-0.0
1,280,670	+		MIT1002_01164	0.32	-0.8