Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01121

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
1,230,052	+		MIT1002_01120	0.14	-2.0
1,230,104	+		MIT1002_01120	0.19	-1.4
1,230,104	+		MIT1002_01120	0.19	-1.5
1,230,117	-		MIT1002_01120	0.21	-2.0
1,230,150	+		MIT1002_01120	0.24	-1.7
1,230,150	-		MIT1002_01120	0.24	-0.6
1,230,157	+		MIT1002_01120	0.25	-1.0
1,230,158	-		MIT1002_01120	0.25	-2.5
1,230,158	-		MIT1002_01120	0.25	-1.6
1,230,158	-		MIT1002_01120	0.25	-1.0
1,230,165	-		MIT1002_01120	0.26	-0.7
1,230,222	+		MIT1002_01120	0.32	-4.4
1,230,224	-		MIT1002_01120	0.32	-1.9
1,230,278	-		MIT1002_01120	0.37	-0.6
1,230,285	+		MIT1002_01120	0.38	-0.7
1,230,285	+		MIT1002_01120	0.38	-1.3
1,230,325	-		MIT1002_01120	0.42	+0.1
1,230,439	-		MIT1002_01120	0.54	-1.5
1,230,530	-		MIT1002_01120	0.63	-3.1
1,230,544	-		MIT1002_01120	0.65	-0.2
1,230,593	+		MIT1002_01120	0.70	-0.5
1,230,635	+		MIT1002_01120	0.74	-3.7
1,230,643	-		MIT1002_01120	0.75	-1.0
1,230,669	+		MIT1002_01120	0.78	-1.2
1,230,683	-		MIT1002_01120	0.79	-2.7
1,230,725	+		MIT1002_01120	0.83	-1.9
1,230,733	-		MIT1002_01120	0.84	-0.6
1,230,751	+		MIT1002_01120	0.86	-1.5
1,230,756	+		MIT1002_01120	0.87	-1.6
1,230,759	-		MIT1002_01120	0.87	-0.3
1,230,759	-		MIT1002_01120	0.87	-1.2
1,230,759	-		MIT1002_01120	0.87	-1.0
1,230,759	-		MIT1002_01120	0.87	-0.2
1,230,765	+		MIT1002_01120	0.88	-2.6
1,230,765	+		MIT1002_01120	0.88	-0.3
1,230,773	-		MIT1002_01120	0.88	-2.1
1,230,773	-		MIT1002_01120	0.88	-1.9
1,230,773	-		MIT1002_01120	0.88	-3.6
1,230,773	-		MIT1002_01120	0.88	-1.3
1,230,773	-		MIT1002_01120	0.88	-1.3
1,230,778	-		MIT1002_01120	0.89	-1.3
1,230,900	+				-1.5
1,230,900	+				-1.3
1,230,911	+				-1.2
1,230,916	+				-0.7
1,231,044	-				-1.9
1,231,127	+		MIT1002_01121	0.13	-1.7
1,231,134	+		MIT1002_01121	0.14	-1.9
1,231,142	-		MIT1002_01121	0.15	-3.5
1,231,221	+		MIT1002_01121	0.27	-0.0
1,231,229	-		MIT1002_01121	0.28	-2.5
1,231,229	-		MIT1002_01121	0.28	-1.5
1,231,244	+		MIT1002_01121	0.31	-1.9
1,231,245	-		MIT1002_01121	0.31	-3.2
1,231,245	-		MIT1002_01121	0.31	-2.4
1,231,288	+		MIT1002_01121	0.37	-3.6
1,231,296	+		MIT1002_01121	0.39	-2.9
1,231,376	-		MIT1002_01121	0.51	-3.7
1,231,377	+		MIT1002_01121	0.51	-1.9
1,231,412	+		MIT1002_01121	0.56	-3.9
1,231,415	-		MIT1002_01121	0.57	-2.3
1,231,458	+		MIT1002_01121	0.63	-2.9
1,231,466	-		MIT1002_01121	0.65	-0.7
1,231,517	+		MIT1002_01121	0.72	-3.1
1,231,533	-		MIT1002_01121	0.75	-0.6
1,231,565	+		MIT1002_01121	0.80	-2.0
1,231,569	+		MIT1002_01121	0.80	-0.8
1,231,570	+		MIT1002_01121	0.81	-2.8
1,231,578	-		MIT1002_01121	0.82	-2.9
1,231,589	+		MIT1002_01121	0.83	-1.3
1,231,607	+		MIT1002_01121	0.86	-0.8
1,231,615	-		MIT1002_01121	0.87	-1.5
1,231,706	-				-3.0
1,231,811	+				-3.3
1,231,818	-				-2.8
1,231,828	+				-3.9
1,231,836	-				-4.5
1,231,838	+				-4.1
1,231,847	-				-4.7
1,231,964	-		MIT1002_01122	0.16	-2.0
1,231,971	-		MIT1002_01122	0.16	-4.9
1,232,016	+		MIT1002_01122	0.19	-4.1
1,232,046	+		MIT1002_01122	0.21	-3.5
1,232,130	-		MIT1002_01122	0.26	-3.1
1,232,132	-		MIT1002_01122	0.26	-3.7
1,232,163	+		MIT1002_01122	0.28	-5.7
1,232,211	+		MIT1002_01122	0.31	-3.6
1,232,212	-		MIT1002_01122	0.31	-2.9
1,232,259	+		MIT1002_01122	0.34	-3.0
1,232,309	-		MIT1002_01122	0.37	-4.2
1,232,346	+		MIT1002_01122	0.39	-1.5
1,232,355	-		MIT1002_01122	0.39	-1.8
1,232,356	+		MIT1002_01122	0.40	-3.1
1,232,357	+		MIT1002_01122	0.40	-2.5
1,232,357	+		MIT1002_01122	0.40	-1.6
1,232,357	+		MIT1002_01122	0.40	-3.4
1,232,365	-		MIT1002_01122	0.40	-3.1
1,232,365	-		MIT1002_01122	0.40	-2.9
1,232,382	+		MIT1002_01122	0.41	-0.3
1,232,390	-		MIT1002_01122	0.42	-3.1
1,232,433	-		MIT1002_01122	0.44	-0.0
1,232,435	-		MIT1002_01122	0.44	-4.1
1,232,439	+		MIT1002_01122	0.45	-4.6
1,232,476	+		MIT1002_01122	0.47	-0.0
1,232,503	+		MIT1002_01122	0.49	-4.1
1,232,511	-		MIT1002_01122	0.49	-3.1
1,232,568	-		MIT1002_01122	0.53	-4.1
1,232,568	-		MIT1002_01122	0.53	-5.7
1,232,610	+		MIT1002_01122	0.55	-4.5
1,232,626	+		MIT1002_01122	0.56	-4.3
1,232,644	-		MIT1002_01122	0.57	-5.1
1,232,663	+		MIT1002_01122	0.58	-0.8
1,232,671	-		MIT1002_01122	0.59	-2.1