Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01049

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
1,157,242	-		MIT1002_01048	0.17	+1.1
1,157,269	-		MIT1002_01048	0.20	-0.2
1,157,418	-		MIT1002_01048	0.33	-2.8
1,157,450	-		MIT1002_01048	0.36	+0.6
1,157,458	-		MIT1002_01048	0.37	+0.2
1,157,463	-		MIT1002_01048	0.37	-1.0
1,157,473	-		MIT1002_01048	0.38	-0.1
1,157,478	-		MIT1002_01048	0.38	+0.1
1,157,566	-		MIT1002_01048	0.46	-1.1
1,157,568	-		MIT1002_01048	0.47	+0.2
1,157,600	+		MIT1002_01048	0.49	+0.7
1,157,614	-		MIT1002_01048	0.51	+0.3
1,157,616	+		MIT1002_01048	0.51	+0.7
1,157,712	+		MIT1002_01048	0.59	+0.5
1,157,724	+		MIT1002_01048	0.61	-0.3
1,157,728	+		MIT1002_01048	0.61	-1.5
1,157,827	+		MIT1002_01048	0.70	+0.3
1,157,827	+		MIT1002_01048	0.70	-0.3
1,157,903	+		MIT1002_01048	0.77	+0.9
1,157,911	+		MIT1002_01048	0.77	-0.2
1,157,962	+		MIT1002_01048	0.82	+0.3
1,157,970	-		MIT1002_01048	0.83	+0.3
1,158,000	+		MIT1002_01048	0.85	+0.9
1,158,048	+		MIT1002_01048	0.90	+1.1
1,158,056	-				-0.1
1,158,076	-				-1.9
1,158,080	+				+0.5
1,158,088	-				-1.0
1,158,115	+				+1.0
1,158,180	+				+0.8
1,158,225	-				-3.9
1,158,273	+				+0.2
1,158,304	+				-1.4
1,158,469	+		MIT1002_01049	0.26	-0.4
1,158,469	+		MIT1002_01049	0.26	-0.2
1,158,512	-		MIT1002_01049	0.30	-2.2
1,158,548	-		MIT1002_01049	0.34	-1.0
1,158,564	-		MIT1002_01049	0.36	+0.4
1,158,575	+		MIT1002_01049	0.37	+0.4
1,158,575	+		MIT1002_01049	0.37	+1.0
1,158,583	-		MIT1002_01049	0.38	-0.7
1,158,618	+		MIT1002_01049	0.42	-0.0
1,158,620	+		MIT1002_01049	0.42	+0.2
1,158,620	+		MIT1002_01049	0.42	+0.6
1,158,623	-		MIT1002_01049	0.42	+0.6
1,158,649	-		MIT1002_01049	0.45	-2.5
1,158,649	-		MIT1002_01049	0.45	+0.3
1,158,651	-		MIT1002_01049	0.45	+0.6
1,158,708	+		MIT1002_01049	0.51	+1.0
1,158,714	-		MIT1002_01049	0.52	+0.3
1,158,727	+		MIT1002_01049	0.53	+0.1
1,158,781	-		MIT1002_01049	0.59	+0.2
1,158,801	+		MIT1002_01049	0.61	+1.3
1,158,925	-		MIT1002_01049	0.74	-0.3
1,158,998	-		MIT1002_01049	0.82	-1.7
1,159,005	-		MIT1002_01049	0.82	-1.0
1,159,006	-		MIT1002_01049	0.82	-0.8
1,159,007	+		MIT1002_01049	0.83	+2.0
1,159,023	-		MIT1002_01049	0.84	+1.0
1,159,026	+		MIT1002_01049	0.85	+0.7
1,159,069	+		MIT1002_01049	0.89	+0.9
1,159,110	+				+0.2
1,159,134	+				-0.6
1,159,134	+				-0.8
1,159,136	+				-0.9
1,159,142	-				-0.5
1,159,159	+				-0.4
1,159,172	+				+0.4
1,159,241	-				+0.4
1,159,252	+				-1.3
1,159,307	+				-0.6
1,159,342	+				-0.0
1,159,347	-				+0.4
1,159,426	-		MIT1002_01050	0.12	+0.2
1,159,465	-		MIT1002_01050	0.14	-3.1
1,159,481	-		MIT1002_01050	0.14	-1.2
1,159,495	-		MIT1002_01050	0.15	-1.1
1,159,500	-		MIT1002_01050	0.15	+0.2
1,159,545	-		MIT1002_01050	0.17	+1.1
1,159,546	-		MIT1002_01050	0.17	+0.4
1,159,652	-		MIT1002_01050	0.23	+0.5
1,159,749	+		MIT1002_01050	0.27	-0.8
1,159,749	+		MIT1002_01050	0.27	-1.3
1,159,757	-		MIT1002_01050	0.28	+0.5
1,159,822	-		MIT1002_01050	0.31	-1.0
1,160,011	+		MIT1002_01050	0.40	-0.4
1,160,013	+		MIT1002_01050	0.40	+0.3
1,160,023	+		MIT1002_01050	0.41	-0.1
1,160,148	-		MIT1002_01050	0.47	+1.2