Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00990

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
1,096,947	-		MIT1002_00988	0.74	-3.1
1,096,997	-		MIT1002_00988	0.80	+0.0
1,096,999	-		MIT1002_00988	0.80	-3.1
1,097,027	+		MIT1002_00988	0.83	-0.8
1,097,042	+		MIT1002_00988	0.85	-2.6
1,097,118	-				-1.9
1,097,120	+				-4.0
1,097,129	-				-1.7
1,097,232	-				+0.8
1,097,234	-				-2.1
1,097,239	+				-1.5
1,097,242	-				+0.2
1,097,242	-				+0.5
1,097,259	+				-1.5
1,097,267	-				+2.3
1,097,271	+				-0.8
1,097,278	+				-0.8
1,097,281	+				-0.0
1,097,289	-				-2.2
1,097,289	-				-2.9
1,097,374	+		MIT1002_00989	0.10	-0.4
1,097,374	+		MIT1002_00989	0.10	-0.3
1,097,374	+		MIT1002_00989	0.10	+0.9
1,097,374	+		MIT1002_00989	0.10	-0.3
1,097,374	+		MIT1002_00989	0.10	+0.9
1,097,382	-		MIT1002_00989	0.12	+0.5
1,097,382	-		MIT1002_00989	0.12	+1.8
1,097,382	-		MIT1002_00989	0.12	+1.2
1,097,382	-		MIT1002_00989	0.12	+1.4
1,097,382	-		MIT1002_00989	0.12	+0.3
1,097,382	-		MIT1002_00989	0.12	-0.2
1,097,387	+		MIT1002_00989	0.13	+0.0
1,097,395	-		MIT1002_00989	0.14	+0.2
1,097,395	-		MIT1002_00989	0.14	+2.1
1,097,474	+		MIT1002_00989	0.29	+0.3
1,097,477	+		MIT1002_00989	0.29	+0.3
1,097,479	+		MIT1002_00989	0.30	+8.4
1,097,569	-		MIT1002_00989	0.46	-0.6
1,097,594	+		MIT1002_00989	0.51	+0.6
1,097,594	+		MIT1002_00989	0.51	-1.1
1,097,604	+		MIT1002_00989	0.53	+0.6
1,097,629	-		MIT1002_00989	0.57	+1.5
1,097,656	+		MIT1002_00989	0.62	+1.7
1,097,700	+		MIT1002_00989	0.70	+0.1
1,097,797	-		MIT1002_00989	0.88	+0.1
1,097,862	-				-0.3
1,097,888	-				-0.2
1,097,895	-				+1.1
1,097,898	-				-0.1
1,097,898	-				+1.4
1,097,960	-		MIT1002_00990	0.12	-2.9
1,097,983	+		MIT1002_00990	0.20	-1.6
1,098,003	+		MIT1002_00990	0.26	+0.7
1,098,003	+		MIT1002_00990	0.26	-1.0
1,098,011	-		MIT1002_00990	0.29	-0.6
1,098,064	+		MIT1002_00990	0.46	-0.8
1,098,111	-		MIT1002_00990	0.61	-0.2
1,098,168	+		MIT1002_00990	0.79	-0.3
1,098,273	+				+0.5
1,098,541	-				-0.3
1,098,597	-		MIT1002_00991	0.17	+0.3
1,098,597	-		MIT1002_00991	0.17	+0.0
1,098,603	+		MIT1002_00991	0.19	-0.3
1,098,623	+		MIT1002_00991	0.24	-0.1
1,098,658	-		MIT1002_00991	0.34	+0.5
1,098,697	+		MIT1002_00991	0.45	+0.4
1,098,703	-		MIT1002_00991	0.46	+0.6
1,098,766	+		MIT1002_00991	0.63	-0.1
1,099,008	-				+0.6
1,099,008	-				+0.6
1,099,049	+				-0.2
1,099,049	+				-0.1
1,099,167	+		MIT1002_00992	0.18	+0.5
1,099,176	-		MIT1002_00992	0.19	+0.1
1,099,190	+		MIT1002_00992	0.21	+0.8