Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00448

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 4
490,160	-				+0.7
490,168	-				+0.1
490,240	+				+0.8
490,240	+				-1.1
490,248	-				-1.0
490,356	-				+0.3
490,373	-				+0.0
490,393	+				-0.6
490,479	+				-1.2
490,493	+				-0.7
490,496	-				-1.1
490,501	-				-0.3
490,591	+		MIT1002_00449	0.15	+0.9
490,614	+		MIT1002_00449	0.16	-0.4
490,636	+		MIT1002_00449	0.17	-0.2
490,685	+		MIT1002_00449	0.20	-0.2
490,693	-		MIT1002_00449	0.21	-1.8
490,826	+		MIT1002_00449	0.28	+1.4
490,834	-		MIT1002_00449	0.28	-1.0
490,841	-		MIT1002_00449	0.29	+0.1
490,901	-		MIT1002_00449	0.32	-2.3
490,908	-		MIT1002_00449	0.33	+1.9
490,937	+		MIT1002_00449	0.34	-0.5
490,937	-		MIT1002_00449	0.34	-1.2
490,964	+		MIT1002_00449	0.36	+0.6
490,971	-		MIT1002_00449	0.36	+1.7
490,971	-		MIT1002_00449	0.36	-0.5
490,984	+		MIT1002_00449	0.37	+0.0
491,041	-		MIT1002_00449	0.40	-0.8