Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS34360

Experiment: succinate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntQEN71_RS34355 and QEN71_RS34360 are separated by 44 nucleotidesQEN71_RS34360 and QEN71_RS34365 are separated by 146 nucleotides QEN71_RS34355: QEN71_RS34355 - MFS transporter, at 1,023,556 to 1,024,896 _RS34355 QEN71_RS34360: QEN71_RS34360 - MarR family transcriptional regulator, at 1,024,941 to 1,025,489 _RS34360 QEN71_RS34365: QEN71_RS34365 - sulfatase-like hydrolase/transferase, at 1,025,636 to 1,027,207 _RS34365 Position (kb) 1024 1025 1026Strain fitness (log2 ratio) -1 0 1at 1023.986 kb on - strand, within QEN71_RS34355at 1024.138 kb on + strand, within QEN71_RS34355at 1024.138 kb on + strand, within QEN71_RS34355at 1024.190 kb on - strand, within QEN71_RS34355at 1024.333 kb on + strand, within QEN71_RS34355at 1024.333 kb on + strand, within QEN71_RS34355at 1024.375 kb on + strand, within QEN71_RS34355at 1024.682 kb on - strand, within QEN71_RS34355at 1024.692 kb on + strand, within QEN71_RS34355at 1025.090 kb on - strand, within QEN71_RS34360at 1025.120 kb on - strand, within QEN71_RS34360at 1025.158 kb on - strand, within QEN71_RS34360at 1025.327 kb on + strand, within QEN71_RS34360at 1025.359 kb on - strand, within QEN71_RS34360at 1025.359 kb on - strand, within QEN71_RS34360at 1025.567 kb on + strandat 1025.591 kb on + strandat 1025.591 kb on + strandat 1025.715 kb on - strandat 1026.108 kb on - strand, within QEN71_RS34365at 1026.135 kb on - strand, within QEN71_RS34365at 1026.135 kb on - strand, within QEN71_RS34365at 1026.239 kb on + strand, within QEN71_RS34365at 1026.240 kb on - strand, within QEN71_RS34365at 1026.308 kb on + strand, within QEN71_RS34365at 1026.309 kb on - strand, within QEN71_RS34365at 1026.359 kb on + strand, within QEN71_RS34365at 1026.359 kb on + strand, within QEN71_RS34365

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Per-strain Table

Position Strand Gene LocusTag Fraction succinate (C)
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1,023,986 - QEN71_RS34355 0.32 +1.0
1,024,138 + QEN71_RS34355 0.43 -0.3
1,024,138 + QEN71_RS34355 0.43 +0.7
1,024,190 - QEN71_RS34355 0.47 -1.3
1,024,333 + QEN71_RS34355 0.58 +0.1
1,024,333 + QEN71_RS34355 0.58 +0.5
1,024,375 + QEN71_RS34355 0.61 +0.3
1,024,682 - QEN71_RS34355 0.84 +0.1
1,024,692 + QEN71_RS34355 0.85 -1.0
1,025,090 - QEN71_RS34360 0.27 -0.5
1,025,120 - QEN71_RS34360 0.33 -0.1
1,025,158 - QEN71_RS34360 0.40 -0.2
1,025,327 + QEN71_RS34360 0.70 -0.4
1,025,359 - QEN71_RS34360 0.76 -0.4
1,025,359 - QEN71_RS34360 0.76 +0.3
1,025,567 + +0.0
1,025,591 + -0.7
1,025,591 + -0.7
1,025,715 - +0.9
1,026,108 - QEN71_RS34365 0.30 -1.3
1,026,135 - QEN71_RS34365 0.32 +0.1
1,026,135 - QEN71_RS34365 0.32 +0.2
1,026,239 + QEN71_RS34365 0.38 -0.4
1,026,240 - QEN71_RS34365 0.38 +0.9
1,026,308 + QEN71_RS34365 0.43 -1.1
1,026,309 - QEN71_RS34365 0.43 -1.6
1,026,359 + QEN71_RS34365 0.46 -0.1
1,026,359 + QEN71_RS34365 0.46 +0.1

Or see this region's nucleotide sequence