Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS28090

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
6,245,590	-		QEN71_RS28080	0.89	-2.4
6,245,590	-		QEN71_RS28080	0.89	-0.9
6,245,613	+				-4.4
6,245,613	+				-3.0
6,245,613	+				-4.8
6,245,613	+				-4.1
6,245,613	+				-4.2
6,245,614	-				-2.1
6,245,614	-				-2.7
6,245,614	-				-1.7
6,245,614	-				-2.9
6,245,614	-				-1.6
6,245,614	-				-1.9
6,245,614	-				-3.4
6,245,664	+				-1.3
6,245,664	+				-0.9
6,245,664	+				-1.8
6,245,664	+				-3.8
6,245,664	+				-4.1
6,245,664	+				-3.6
6,245,664	+				-2.2
6,245,664	+				-0.5
6,245,665	-				-2.5
6,245,665	-				-3.2
6,245,665	-				-1.8
6,245,665	-				-1.1
6,245,728	-				+0.3
6,245,728	-				-1.8
6,245,728	-				+0.4
6,245,728	-				-1.1
6,245,750	+				-0.2
6,245,750	+				-0.4
6,245,750	+				-0.8
6,245,750	+				+1.1
6,245,750	+				+0.3
6,245,751	-				-0.4
6,245,845	+				+0.0
6,245,846	-				-0.6
6,245,864	+				+0.3
6,245,886	+		QEN71_RS28085	0.11	-0.3
6,245,887	-		QEN71_RS28085	0.11	-0.0
6,245,887	-		QEN71_RS28085	0.11	+1.9
6,245,964	+		QEN71_RS28085	0.22	-0.8
6,245,964	+		QEN71_RS28085	0.22	+0.3
6,245,964	+		QEN71_RS28085	0.22	-0.3
6,245,965	-		QEN71_RS28085	0.22	-0.2
6,245,965	-		QEN71_RS28085	0.22	-0.5
6,246,141	+		QEN71_RS28085	0.47	+0.4
6,246,141	+		QEN71_RS28085	0.47	-1.0
6,246,141	+		QEN71_RS28085	0.47	-0.4
6,246,141	+		QEN71_RS28085	0.47	+0.5
6,246,141	+		QEN71_RS28085	0.47	+0.5
6,246,141	+		QEN71_RS28085	0.47	-1.9
6,246,142	-		QEN71_RS28085	0.47	-2.8
6,246,142	-		QEN71_RS28085	0.47	+0.2
6,246,142	-		QEN71_RS28085	0.47	+0.7
6,246,142	-		QEN71_RS28085	0.47	+0.7
6,246,142	-		QEN71_RS28085	0.47	+1.0
6,246,165	+		QEN71_RS28085	0.51	+0.5
6,246,166	-		QEN71_RS28085	0.51	-0.5
6,246,177	+		QEN71_RS28085	0.52	-1.7
6,246,178	-		QEN71_RS28085	0.52	-0.1
6,246,178	-		QEN71_RS28085	0.52	+1.9
6,246,178	-		QEN71_RS28085	0.52	+0.5
6,246,178	-		QEN71_RS28085	0.52	-0.7
6,246,380	+		QEN71_RS28085	0.81	-0.5
6,246,380	+		QEN71_RS28085	0.81	-1.1
6,246,446	-				-0.7
6,246,446	-				-0.5
6,246,446	-				+0.1
6,246,446	-				-1.1
6,246,487	+				+0.3
6,246,487	+				+0.2
6,246,487	+				+0.3
6,246,488	-				+2.0
6,246,488	-				-0.5
6,246,488	-				-1.0
6,246,553	+				+1.1
6,246,553	+				-0.3
6,246,553	+				-0.0
6,246,553	+				+0.6
6,246,553	+				-1.2
6,246,553	+				+1.2
6,246,554	-				-0.1
6,246,554	-				+0.2
6,246,554	-				-0.4
6,246,554	-				-0.7
6,246,554	-				+0.7
6,246,554	-				+1.3
6,246,554	-				-0.5
6,246,586	+				+0.9
6,246,586	+				-0.1
6,246,586	+				-0.7
6,246,586	+				-0.4
6,246,586	+				-0.5
6,246,587	-				-0.5
6,246,587	-				+0.9
6,246,587	-				-1.1
6,246,587	-				+0.1
6,246,691	+		QEN71_RS28090	0.17	-0.5
6,246,691	+		QEN71_RS28090	0.17	-0.6
6,246,691	+		QEN71_RS28090	0.17	-0.5
6,246,691	+		QEN71_RS28090	0.17	-0.1
6,246,692	-		QEN71_RS28090	0.17	-0.5
6,246,692	-		QEN71_RS28090	0.17	-0.1
6,246,692	-		QEN71_RS28090	0.17	+0.5
6,246,692	-		QEN71_RS28090	0.17	-1.3
6,246,692	-		QEN71_RS28090	0.17	-0.1
6,246,700	+		QEN71_RS28090	0.18	-1.5
6,246,700	+		QEN71_RS28090	0.18	-1.0
6,246,700	+		QEN71_RS28090	0.18	+0.5
6,246,700	+		QEN71_RS28090	0.18	-0.5
6,246,701	-		QEN71_RS28090	0.18	+0.3
6,246,701	-		QEN71_RS28090	0.18	-0.3
6,246,701	-		QEN71_RS28090	0.18	-0.3
6,246,701	-		QEN71_RS28090	0.18	+0.4
6,246,715	+		QEN71_RS28090	0.19	+0.3
6,246,715	+		QEN71_RS28090	0.19	-1.1
6,246,716	-		QEN71_RS28090	0.19	-0.2
6,246,716	-		QEN71_RS28090	0.19	-0.1
6,246,716	-		QEN71_RS28090	0.19	+0.9
6,246,790	+		QEN71_RS28090	0.27	+0.2
6,246,790	+		QEN71_RS28090	0.27	-0.1
6,246,790	+		QEN71_RS28090	0.27	-0.3
6,246,791	-		QEN71_RS28090	0.27	+0.5
6,246,791	-		QEN71_RS28090	0.27	+0.3
6,246,791	-		QEN71_RS28090	0.27	-0.3
6,246,791	-		QEN71_RS28090	0.27	+0.8
6,246,791	-		QEN71_RS28090	0.27	-3.9
6,246,791	-		QEN71_RS28090	0.27	-2.0
6,246,791	-		QEN71_RS28090	0.27	+0.1
6,246,913	+		QEN71_RS28090	0.39	+0.3
6,246,913	+		QEN71_RS28090	0.39	-0.1
6,246,914	-		QEN71_RS28090	0.39	-1.2
6,246,914	-		QEN71_RS28090	0.39	-0.5
6,246,914	-		QEN71_RS28090	0.39	+1.9
6,246,985	+		QEN71_RS28090	0.46	-1.5
6,246,985	+		QEN71_RS28090	0.46	+0.1
6,246,985	+		QEN71_RS28090	0.46	+1.3
6,246,985	+		QEN71_RS28090	0.46	-0.6
6,246,985	+		QEN71_RS28090	0.46	-0.7
6,246,985	+		QEN71_RS28090	0.46	-0.2
6,246,985	+		QEN71_RS28090	0.46	+0.9
6,246,985	+		QEN71_RS28090	0.46	+0.1
6,246,985	+		QEN71_RS28090	0.46	+1.0
6,246,985	+		QEN71_RS28090	0.46	-0.7
6,246,986	-		QEN71_RS28090	0.47	-0.7
6,246,986	-		QEN71_RS28090	0.47	-2.2
6,246,986	-		QEN71_RS28090	0.47	-0.3
6,246,986	-		QEN71_RS28090	0.47	+1.5
6,246,986	-		QEN71_RS28090	0.47	-1.0
6,246,986	-		QEN71_RS28090	0.47	-0.6
6,246,986	-		QEN71_RS28090	0.47	+0.3
6,246,986	-		QEN71_RS28090	0.47	+1.0
6,246,986	-		QEN71_RS28090	0.47	+0.2
6,246,986	-		QEN71_RS28090	0.47	+0.9
6,246,986	-		QEN71_RS28090	0.47	-0.3
6,246,986	-		QEN71_RS28090	0.47	-0.0
6,246,986	-		QEN71_RS28090	0.47	-0.6
6,246,986	-		QEN71_RS28090	0.47	-0.3
6,247,087	+		QEN71_RS28090	0.57	+0.3
6,247,087	+		QEN71_RS28090	0.57	-2.4
6,247,088	-		QEN71_RS28090	0.57	+0.7
6,247,088	-		QEN71_RS28090	0.57	+0.9
6,247,088	-		QEN71_RS28090	0.57	+0.1
6,247,088	-		QEN71_RS28090	0.57	+0.2
6,247,088	-		QEN71_RS28090	0.57	+0.3
6,247,135	+		QEN71_RS28090	0.62	-0.4
6,247,135	+		QEN71_RS28090	0.62	+0.6
6,247,135	+		QEN71_RS28090	0.62	-0.3
6,247,135	+		QEN71_RS28090	0.62	+0.1
6,247,136	-		QEN71_RS28090	0.62	+0.1
6,247,136	-		QEN71_RS28090	0.62	+0.3
6,247,136	-		QEN71_RS28090	0.62	-0.0
6,247,136	-		QEN71_RS28090	0.62	+0.9
6,247,240	+		QEN71_RS28090	0.72	-0.9
6,247,240	+		QEN71_RS28090	0.72	+0.6
6,247,240	+		QEN71_RS28090	0.72	-0.6
6,247,241	-		QEN71_RS28090	0.72	-1.2
6,247,243	+		QEN71_RS28090	0.72	+0.6
6,247,243	+		QEN71_RS28090	0.72	-1.1
6,247,243	+		QEN71_RS28090	0.72	+0.2
6,247,243	+		QEN71_RS28090	0.72	+0.1
6,247,243	+		QEN71_RS28090	0.72	-1.1
6,247,243	+		QEN71_RS28090	0.72	+0.7
6,247,243	+		QEN71_RS28090	0.72	-2.3
6,247,243	+		QEN71_RS28090	0.72	+0.1
6,247,243	+		QEN71_RS28090	0.72	-0.4
6,247,244	-		QEN71_RS28090	0.72	-0.3
6,247,244	-		QEN71_RS28090	0.72	+0.9
6,247,244	-		QEN71_RS28090	0.72	+0.3
6,247,244	-		QEN71_RS28090	0.72	+0.1
6,247,244	-		QEN71_RS28090	0.72	-1.0
6,247,244	-		QEN71_RS28090	0.72	+1.5
6,247,244	-		QEN71_RS28090	0.72	-0.1
6,247,244	-		QEN71_RS28090	0.72	+0.3
6,247,244	-		QEN71_RS28090	0.72	-1.1
6,247,244	-		QEN71_RS28090	0.72	-0.8
6,247,252	+		QEN71_RS28090	0.73	-0.1
6,247,252	+		QEN71_RS28090	0.73	+0.1
6,247,252	+		QEN71_RS28090	0.73	+0.2
6,247,252	+		QEN71_RS28090	0.73	+1.4
6,247,252	+		QEN71_RS28090	0.73	-0.8
6,247,252	+		QEN71_RS28090	0.73	-0.9
6,247,252	+		QEN71_RS28090	0.73	-1.1
6,247,252	+		QEN71_RS28090	0.73	-0.1
6,247,253	-		QEN71_RS28090	0.73	+0.2
6,247,253	-		QEN71_RS28090	0.73	-0.2
6,247,253	-		QEN71_RS28090	0.73	+0.7
6,247,253	-		QEN71_RS28090	0.73	+0.1
6,247,253	-		QEN71_RS28090	0.73	-0.9
6,247,253	-		QEN71_RS28090	0.73	+0.5
6,247,253	-		QEN71_RS28090	0.73	+0.5
6,247,253	-		QEN71_RS28090	0.73	-0.0
6,247,270	+		QEN71_RS28090	0.75	+1.1
6,247,270	+		QEN71_RS28090	0.75	+0.1
6,247,271	-		QEN71_RS28090	0.75	+0.9
6,247,271	-		QEN71_RS28090	0.75	-1.5
6,247,454	+				+0.9
6,247,454	+				+0.2
6,247,483	+				-0.7
6,247,484	-				-1.3
6,247,484	-				-0.1
6,247,484	-				-0.4
6,247,484	-				-1.2
6,247,484	-				+0.4
6,247,626	-				-0.0
6,247,634	-				-2.1
6,247,693	+				+0.4
6,247,693	+				-2.8
6,247,693	+				-2.6
6,247,693	+				-0.7
6,247,693	+				-0.1
6,247,693	+				+1.3
6,247,693	+				-1.7
6,247,693	+				-0.5
6,247,694	-				-1.0
6,247,694	-				-0.9